RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MYPOPQ86VE0 399 aaPredicted RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 PAQR4Q8N4S7 273 aaPredicted RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF610Q8N9Z0 462 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 UBASH3BQ8TF42 649 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 SNRNP40Q96DI7 357 aaKnown RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 SPACA5Q96QH8 159 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 C11orf54Q9H0W9 315 aaPredicted RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 OPN3Q9H1Y3 402 aaPredicted RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF835Q9Y2P0 537 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 GGT3PA6NGU5 568 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 ICMTO60725 284 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 KDM4BO94953 1096 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 IL2RAP01589 272 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 HCKP08631 526 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 VSIG8P0DPA2 414 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 CCNOP22674 350 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 APLNRP35414 380 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 PRSS12P56730 875 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 GK2Q14410 553 aaPredicted RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 P2RY6Q15077 328 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 PRR30Q53SZ7 412 aaPredicted RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 ZBTB37Q5TC79 503 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 KRT74Q7RTS7 529 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 NRARPQ7Z6K4 114 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 C17orf78Q8N4C9 275 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 WDR31Q8NA23 367 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 SLC30A7Q8NEW0 376 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 REPIN1Q9BWE0 567 aaKnown RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 TP63Q9H3D4 680 aaPredicted RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 AUNIPQ9H7T9 357 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 TBCCD1Q9NVR7 557 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 MRPS7Q9Y2R9 242 aaKnown RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 TMEM14DPA8MWL7 114 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 GABARAPH6UMI1 98 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 GMDSO60547 372 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 NGFP01138 241 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 GLI4P10075 376 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 ALDH3B1P43353 468 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 OR3A4PP47883 348 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 UBE2NP61088 152 aaKnown RBP8.16□□□□□ -1.1
SF3B1-211ENST00000487698 MRPS10P82664 201 aaKnown RBP8.16□□□□□ -1.1
SF3B1-211ENST00000487698 TSC22D1Q15714 1073 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 KISS1Q15726 138 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 CCBE1Q6UXH8 406 aaPredicted RBP8.16□□□□□ -1.1
SF3B1-211ENST00000487698 UNQ6494/PRO21346Q6UXR6 183 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 C3P1Q6ZMU1 363 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 BEND4Q6ZU67 534 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 CXorf67Q86X51 503 aaPredicted RBP8.16□□□□□ -1.1
SF3B1-211ENST00000487698 DOLPP1Q86YN1 238 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF101Q8IZC7 436 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 C19orf18Q8NEA5 215 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 C15orf40Q8WUR7 153 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 ITFG2Q969R8 447 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 SPSB1Q96BD6 273 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 SFXN3Q9BWM7 321 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 ASF1BQ9NVP2 202 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 MRPS28Q9Y2Q9 187 aaKnown RBP8.16□□□□□ -1.1
SF3B1-211ENST00000487698 RBMX2Q9Y388 322 aaKnown RBP8.16□□□□□ -1.1
SF3B1-211ENST00000487698 ATRXP46100 2492 aa8.16□□□□□ -1.1
SF3B1-211ENST00000487698 A0A0A6YYH2 397 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 LINC00854A0A1B0GVQ3 168 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 A0A1W2PR80 420 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 A6NJ64 397 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 J3QW42 95 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 LYRM1O43325 122 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 IGKV3-15P01624 115 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 CELA3BP08861 270 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 CD3GP09693 182 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 FAM157BP0CG42 384 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 NAT2P11245 290 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 PMPCAQ10713 525 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 DMRTC1Q5HYR2 192 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 CLVS2Q5SYC1 327 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 AWAT2Q6E213 333 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 OR10K2Q6IF99 312 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 RFPL4BQ6ZWI9 263 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 OR2W3Q7Z3T1 314 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 ANGPTL5Q86XS5 388 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 ZCCHC14Q8WYQ9 949 aaKnown RBP8.15□□□□□ -1.1
SF3B1-211ENST00000487698 GCDHQ92947 438 aaPredicted RBP8.15□□□□□ -1.1
SF3B1-211ENST00000487698 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 SLC22A4Q9H015 551 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 ATG5Q9H1Y0 275 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 POFUT1Q9H488 388 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 OPA3Q9H6K4 179 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 DIABLOQ9NR28 239 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 GPR173Q9NS66 373 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 RAB22AQ9UL26 194 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 STARD10Q9Y365 291 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 SHANK1Q9Y566 2161 aa8.15□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF816-ZNF321PA0A0X1KG74 233 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 PRRG2O14669 202 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 UBBP0CG47 229 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 CBR1P16152 277 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 RANBP1P43487 201 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 MALLQ13021 153 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 CNN3Q15417 329 aaKnown RBP8.15□□□□□ -1.11
SF3B1-211ENST00000487698 TBC1D28Q2M2D7 210 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 ZNF474Q6S9Z5 364 aaPredicted RBP8.15□□□□□ -1.11
SF3B1-211ENST00000487698 GLIPR1L1Q6UWM5 242 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms