RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 IL20Q9NYY1 176 aa7.04□□□□□ -1.28
PRKCB-208ENST00000487674 RNF114Q9Y508 228 aa7.04□□□□□ -1.28
PRKCB-208ENST00000487674 LYVE1Q9Y5Y7 322 aa7.04□□□□□ -1.28
PRKCB-208ENST00000487674 IGHV3OR15-7A0A075B7D8 119 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 hCG_38984A0A1B0GV85 526 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 DHRS12A0PJE2 317 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 BTBD17A6NE02 478 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.03□□□□□ -1.28
PRKCB-208ENST00000487674 TBX1O43435 398 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 CLPXO76031 633 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 ANXA2P07355 339 aaKnown RBP7.03□□□□□ -1.28
PRKCB-208ENST00000487674 FBP1P09467 338 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 SPI1P17947 270 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 CFL1P23528 166 aaKnown RBP7.03□□□□□ -1.28
PRKCB-208ENST00000487674 CX3CR1P49238 355 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 HMGA2P52926 109 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 BLVRAP53004 296 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 SLC25A1P53007 311 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 PROK1P58294 105 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 KRTAP10-3P60369 221 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 CSNK2BP67870 215 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 FAM3AP98173 230 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 CRMP1Q14194 572 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 TIGD6Q17RP2 521 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 SPATS1Q496A3 300 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 WDR38Q5JTN6 314 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 ASPHD2Q6ICH7 369 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 ZNF770Q6IQ21 691 aaPredicted RBP7.03□□□□□ -1.28
PRKCB-208ENST00000487674 WDR82Q6UXN9 313 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 RASSF6Q6ZTQ3 369 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 SLC16A9Q7RTY1 509 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 SLC36A1Q7Z2H8 476 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 CMTM4Q8IZR5 234 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 LY6G5BQ8NDX9 201 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 OR52H1Q8NGJ2 320 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 OR6K6Q8NGW6 343 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 UBE2FQ969M7 185 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 REEP6Q96HR9 211 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 RBM4BQ9BQ04 359 aaKnown RBP7.03□□□□□ -1.28
PRKCB-208ENST00000487674 ELAC2Q9BQ52 826 aaKnown RBP7.03□□□□□ -1.28
PRKCB-208ENST00000487674 NMNAT2Q9BZQ4 307 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 TLNRD1Q9H1K6 362 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 TOR3AQ9H497 397 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 CNTD2Q9H8S5 307 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 SP140LQ9H930 580 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 CENPMQ9NSP4 180 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 ZNRD1Q9P1U0 126 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 ONECUT1Q9UBC0 465 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 VPREB3Q9UKI3 123 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 BAIAP2Q9UQB8 552 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 CAB39Q9Y376 341 aaPredicted RBP7.03□□□□□ -1.28
PRKCB-208ENST00000487674 FAM96BQ9Y3D0 163 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 N6AMT1Q9Y5N5 214 aa7.03□□□□□ -1.28
PRKCB-208ENST00000487674 A0A1B0GW55 424 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 NKX6-3A6NJ46 265 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 SLC22A31A6NKX4 558 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 RIIAD1A6NNX1 92 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 TNFRSF11BO00300 401 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 ZNF593O00488 134 aaPredicted RBP7.02□□□□□ -1.29
PRKCB-208ENST00000487674 CCNB2O95067 398 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 IFNGP01579 166 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 APOC1P02654 83 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 GYPBP06028 91 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DUX4L2P0CJ85 424 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DUX4L3P0CJ86 424 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DUX4L4P0CJ87 422 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DUX4L5P0CJ88 424 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DUX4L6P0CJ89 424 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DUX4L7P0CJ90 424 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 HSD11B1P28845 292 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 MSX2P35548 267 aaPredicted RBP7.02□□□□□ -1.29
PRKCB-208ENST00000487674 GNALP38405 381 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 NAA10P41227 235 aaPredicted RBP7.02□□□□□ -1.29
PRKCB-208ENST00000487674 MAGEA2P43356 314 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 EIF2B1Q14232 305 aaKnown RBP7.02□□□□□ -1.29
PRKCB-208ENST00000487674 SNCBQ16143 134 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 TAF9Q16594 264 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 STUMQ69YW2 141 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DHRS7BQ6IAN0 325 aaPredicted RBP7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DUX4L9Q6RFH8 374 aaPredicted RBP7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DPY19L4Q7Z388 723 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 C11orf53Q8IXP5 236 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 PDZD9Q8IXQ8 264 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 FGFRL1Q8N441 504 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 FTMTQ8N4E7 242 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 FAM216BQ8N7L0 139 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 ZSCAN4Q8NAM6 433 aaPredicted RBP7.02□□□□□ -1.29
PRKCB-208ENST00000487674 AQP11Q8NBQ7 271 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 CSNK2A3Q8NEV1 391 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 OR2T33Q8NG76 320 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 OR1M1Q8NGA1 313 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 OR4Q3Q8NH05 313 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 NPRL2Q8WTW4 380 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 RNF133Q8WVZ7 376 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 CCL13Q99616 98 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 PAPOLGQ9BWT3 736 aaKnown RBP7.02□□□□□ -1.29
PRKCB-208ENST00000487674 TSSK6Q9BXA6 273 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 DNTTIP1Q9H147 329 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 RGCCQ9H4X1 137 aa7.02□□□□□ -1.29
PRKCB-208ENST00000487674 C16orf95Q9H693 158 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms