RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 COPS4Q9BT78 406 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 DCUN1D5Q9BTE7 237 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 OSBPL11Q9BXB4 747 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 UGT2B28Q9BY64 529 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 DEFB127Q9H1M4 99 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 POMKQ9H5K3 350 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 ISG20L2Q9H9L3 353 aaKnown RBP1.32□□□□□ -2.2
USP9X-208ENST00000487625 EML4Q9HC35 981 aaKnown RBP1.32□□□□□ -2.2
USP9X-208ENST00000487625 ISYNA1Q9NPH2 558 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 ACOT13Q9NPJ3 140 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 TIGARQ9NQ88 270 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 AGPAT4Q9NRZ5 378 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 PAQR5Q9NXK6 330 aaPredicted RBP1.32□□□□□ -2.2
USP9X-208ENST00000487625 DPM3Q9P2X0 92 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 CLCF1Q9UBD9 225 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 SHPKQ9UHJ6 478 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 AP3M1Q9Y2T2 418 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 V9GY05 133 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 ELP1O95163 1332 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 MSH6P52701 1360 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 NCOA1Q15788 1441 aa1.32□□□□□ -2.2
USP9X-208ENST00000487625 BRCA1P38398 1863 aaKnown RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 TRAV8-7A0A075B6U6 113 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 IGHV3OR16-13A0A075B7E8 117 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 IGLV1-36A0A0B4J1U3 117 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 IGKV1D-13A0A0B4J2D9 117 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 IGHV3-35A0A0C4DH35 117 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 ZNF816-ZNF321PA0A0X1KG74 233 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 A0A1W2PQL4 384 aaPredicted RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 TRABD2BA6NFA1 517 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 ZFP92A6NM28 416 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 DHRS7CA6NNS2 312 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 TMEM114B3SHH9 223 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 C12orf77C9JDV5 145 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 M0R1B8 84 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 DFFAO00273 331 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 SULT1C2O00338 296 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 PHYHO14832 338 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 MAGEB4O15481 346 aaPredicted RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 NUPL2O15504 423 aaKnown RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 FADS1O60427 444 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 SLC16A7O60669 478 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 ADAP1O75689 374 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 CIAO1O76071 339 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 SLC22A5O76082 557 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 VAMP5O95183 116 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 SNAPINO95295 136 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 TNFAIP8O95379 198 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 PSMG1O95456 288 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 TTC4O95801 387 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 GCGP01275 180 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 IGHV3-48P01763 117 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 HLA-DRAP01903 254 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 CTSLP07711 333 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 MRPL3P09001 348 aaKnown RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 LIMS3P0CW19 117 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 LIMS4P0CW20 117 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 PET100P0DJ07 73 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 PGA4P0DJD7 388 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 PGA3P0DJD8 388 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 PGA5P0DJD9 388 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 GIMD1P0DJR0 217 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 IGKV1-13P0DP09 117 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 THRAP10827 490 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 LIPCP11150 499 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 SLC2A1P11166 492 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 CBR1P16152 277 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 GABRG2P18507 467 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 HTR1FP30939 366 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 SHMT2P34897 504 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 RPA3P35244 121 aaPredicted RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 GCKP35557 465 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 ARL2P36404 184 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 SERPINB5P36952 375 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 MYCNOSP40205 109 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 PPP1R2P41236 205 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 RANBP1P43487 201 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 HSPA13P48723 471 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 HCAR3P49019 387 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 IDH3GP51553 393 aaPredicted RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 RAP1GDS1P52306 607 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 SLC25A1P53007 311 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 WNT4P56705 351 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 RIPPLY3P57055 190 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 TAS2R31P59538 309 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 PPP1CBP62140 327 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 LSM6P62312 80 aaKnown RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 TGFBR3Q03167 851 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 IFFO1Q0D2I5 559 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 ECH1Q13011 328 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 MLLT11Q13015 90 aaPredicted RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 PDIA2Q13087 525 aaKnown RBP1.31□□□□□ -2.2
USP9X-208ENST00000487625 FAM53BQ14153 422 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 FLOT2Q14254 428 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 QPRTQ15274 297 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 POU2AF1Q16633 256 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 TBC1D28Q2M2D7 210 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 SMUG1Q53HV7 270 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 OR2B11Q5JQS5 317 aa1.31□□□□□ -2.2
USP9X-208ENST00000487625 OGFRL1Q5TC84 451 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms