RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 FAM157AC9JC47 383 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 ZNF878C9JN71 531 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 C9JQL5 133 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 SDCBPO00560 298 aaPredicted RBP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 FBXO24O75426 580 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 EIF3GO75821 320 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 HTR3BO95264 441 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 IGLV3-19P01714 112 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 SERPINA5P05154 406 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 HCKP08631 526 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 HOXB5P09067 269 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 PAX6P26367 422 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 PTGFRP43088 359 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 HABP2Q14520 560 aaPredicted RBP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 FAM76BQ5HYJ3 339 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 THEM4Q5T1C6 240 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 GKN2Q86XP6 184 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 OR8B12Q8NGG6 310 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 ZDHHC12Q96GR4 267 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 SULT4A1Q9BR01 284 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 NUDT22Q9BRQ3 303 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 URM1Q9BTM9 101 aaKnown RBP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 VN1R1Q9GZP7 353 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 EGLN1Q9GZT9 426 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 DUSP15Q9H1R2 295 aaPredicted RBP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 ZNF304Q9HCX3 659 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 FANCFQ9NPI8 374 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 GPR84Q9NQS5 396 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 PARP11Q9NR21 331 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 SERINC1Q9NRX5 453 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 PLA2G2EQ9NZK7 142 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 CLEC1BQ9P126 229 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 ASH2LQ9UBL3 628 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 SUSD2Q9UGT4 822 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 CD207Q9UJ71 328 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 B3GALT5Q9Y2C3 310 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 POMT1Q9Y6A1 747 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 AGPAT2O15120 278 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 CST4P01036 141 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 SFTPBP07988 381 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 GIMD1P0DJR0 217 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 SLC2A1P11166 492 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF708P17019 499 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF17P17021 662 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 ADH6P28332 368 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 CD80P33681 288 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 DHPSP49366 369 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 F2RL1P55085 397 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 SNU13P55769 128 aaKnown RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF121P58317 390 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 TAS2R46P59540 309 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 RAB5BP61020 215 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 CSNK2A1P68400 391 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 DLX2Q07687 328 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 C17orf67Q0P5P2 114 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 RBM39Q14498 530 aaKnown RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 TMEM268Q5VZI3 342 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 C16orf47Q6ZP98 133 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 FAM89BQ8N5H3 189 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 C15orf54Q8N8G6 183 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF784Q8NCA9 323 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 CSNK2A3Q8NEV1 391 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 OR2AJ1Q8NGZ0 328 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 EMG1Q92979 244 aaKnown RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 FAM71F1Q96KD3 344 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 GPER1Q99527 375 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 CRB3Q9BUF7 120 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 CNTNAP3Q9BZ76 1288 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 OR10A2Q9H208 303 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 ALKBH4Q9NXW9 302 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF319Q9P2F9 582 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 B3GAT1Q9P2W7 334 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 VDAC3Q9Y277 283 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 XIRP2A4UGR9 3374 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 A0A1W2PNV4 684 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 ACAA1P09110 424 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 DVL1P1P54792 670 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 FBXW4P57775 412 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 SPEM2Q0P670 501 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 FOXF1Q12946 379 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 ECH1Q13011 328 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 OR2A2Q6IF42 318 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 DHRS11Q6UWP2 260 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 LANCL3Q6ZV70 420 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 OR1L3Q8NH93 324 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 SSC4DQ8WTU2 575 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 KIRREL1Q96J84 757 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 RAB33BQ9H082 229 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 EHFQ9NZC4 300 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 CACFD1Q9UGQ2 172 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 RPH3AQ9Y2J0 694 aaPredicted RBP10.77□□□□□ -0.69
COL3A1-206ENST00000487010 POLR1DQ9Y2S0 133 aa10.77□□□□□ -0.69
COL3A1-206ENST00000487010 VSTM2BA6NLU5 285 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 H3BML4 177 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 CCL1P22362 96 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 ANOS1P23352 680 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 PTAFRP25105 342 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 RPL12P30050 165 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms