RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ELF5Q9UKW6 265 aaPredicted RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 A6NL46 340 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 ZNF736B4DX44 427 aaPredicted RBP17.79■□□□□ 0.44
HPS3-206ENST00000486530 CDC14BO60729 498 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 ACTL6AO96019 429 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 KISS1Q15726 138 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 CDNFQ49AH0 187 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 SFRP5Q5T4F7 317 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 ZNF626Q68DY1 528 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 SEZ6L2Q6UXD5 910 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 FJX1Q86VR8 437 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 FAM109AQ8N4B1 249 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 AKR7LQ8NHP1 331 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 SGK3Q96BR1 496 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 CMBLQ96DG6 245 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 TMEM59Q9BXS4 323 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 WNT5BQ9H1J7 359 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 NPDC1Q9NQX5 325 aaPredicted RBP17.79■□□□□ 0.44
HPS3-206ENST00000486530 ZNF391Q9UJN7 358 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 NPTNQ9Y639 398 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 DMXL1Q9Y485 3027 aa17.79■□□□□ 0.44
HPS3-206ENST00000486530 ZNF724A8MTY0 619 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 MPIG6BO95866 241 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 FCER2P06734 321 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 ALDH3B1P43353 468 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 ARG2P78540 354 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 SRSF6Q13247 344 aaKnown RBP17.78■□□□□ 0.44
HPS3-206ENST00000486530 UBE2V2Q15819 145 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 TRAPPC6BQ86SZ2 158 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 SKA3Q8IX90 412 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 SEMA6DQ8NFY4 1073 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 HAS2Q92819 552 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 BCO1Q9HAY6 547 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 UPB1Q9UBR1 384 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 ZP1P60852 638 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 HGFACQ04756 655 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 SLC10A1Q14973 349 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 TUSC5Q8IXB3 177 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 TMEM178AQ8NBL3 297 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 TMEM104Q8NE00 496 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 REEP6Q96HR9 211 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 FAM210AQ96ND0 272 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 PRRG4Q9BZD6 226 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 CST11Q9H112 138 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 ZNF69Q9UC07 566 aa17.78■□□□□ 0.44
HPS3-206ENST00000486530 RPL36A-HNRNPH2H7BZ11 118 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 NKX2-8O15522 239 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 LCATP04180 440 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 ITGB2P05107 769 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 MMP7P09237 267 aaPredicted RBP17.77■□□□□ 0.43
HPS3-206ENST00000486530 PATE4P0C8F1 98 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 MEF2DQ14814 521 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 RNPS1Q15287 305 aaKnown RBP17.77■□□□□ 0.43
HPS3-206ENST00000486530 ZNF766Q5HY98 468 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 CHMP1BQ7LBR1 199 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.77■□□□□ 0.43
HPS3-206ENST00000486530 SPICQ8N5J4 248 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 FNDC9Q8TBE3 224 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 SLC25A21Q9BQT8 299 aaPredicted RBP17.77■□□□□ 0.43
HPS3-206ENST00000486530 NICN1Q9BSH3 213 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 URM1Q9BTM9 101 aaKnown RBP17.77■□□□□ 0.43
HPS3-206ENST00000486530 GON7Q9BXV9 100 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 ZNF436Q9C0F3 470 aaPredicted RBP17.77■□□□□ 0.43
HPS3-206ENST00000486530 SLC7A10Q9NS82 523 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 ATPIF1Q9UII2 106 aa17.77■□□□□ 0.43
HPS3-206ENST00000486530 CNOT1A5YKK6 2376 aaKnown RBP17.76■□□□□ 0.43
HPS3-206ENST00000486530 AMY2AP04746 511 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 RLN1P04808 185 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 GSTP1P09211 210 aaKnown RBP17.76■□□□□ 0.43
HPS3-206ENST00000486530 GNB3P16520 340 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 PTGFRP43088 359 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 CAMK2BQ13554 666 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 NDUFA5Q16718 116 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 SLC36A1Q7Z2H8 476 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 OR56B1Q8NGI3 324 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 FGFBP3Q8TAT2 258 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 SELENOIQ9C0D9 397 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 RGCCQ9H4X1 137 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 CALHM2Q9HA72 323 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 SCP2D1Q9UJQ7 156 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 ZNF407Q9C0G0 2248 aa17.76■□□□□ 0.43
HPS3-206ENST00000486530 A0A0A6YYD4 124 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 ZNF587BE7ETH6 402 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 M0QYG6 137 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 CRTAPO75718 401 aaPredicted RBP17.75■□□□□ 0.43
HPS3-206ENST00000486530 IGHV3-9P01782 118 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 VSIG10L2P0DP72 767 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 NAT2P11245 290 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 WT1P19544 449 aaPredicted RBP17.75■□□□□ 0.43
HPS3-206ENST00000486530 RIPPLY1Q0D2K3 151 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 Q5BKY6 102 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 CRIP3Q6Q6R5 217 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 OR2AE1Q8NHA4 323 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 NPRL2Q8WTW4 380 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 NUDCD2Q8WVJ2 157 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 TINAGL1Q9GZM7 467 aaPredicted RBP17.75■□□□□ 0.43
HPS3-206ENST00000486530 IFT46Q9NQC8 304 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 DLL4Q9NR61 685 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 PTPRZ1P23471 2315 aaPredicted RBP17.75■□□□□ 0.43
HPS3-206ENST00000486530 DNAJC13O75165 2243 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms