RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 FAM90A27PA6NNH2 459 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 SLC17A2O00624 439 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 GMDSO60547 372 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 GNLYP22749 145 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 PPP1CBP62140 327 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 TLE1Q04724 770 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 PLA2G7Q13093 441 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 ZNF846Q147U1 533 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 RAB11BQ15907 218 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 NKAIN3Q8N8D7 197 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 DTX3Q8N9I9 347 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 OR4D6Q8NGJ1 314 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 SLC25A28Q96A46 364 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 ZC3HAV1LQ96H79 300 aaKnown RBP12.41□□□□□ -0.42
COL9A1-207ENST00000486080 BBC3Q96PG8 261 aaPredicted RBP12.41□□□□□ -0.42
COL9A1-207ENST00000486080 OR2J1Q9GZK6 312 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 SPATA2Q9UM82 520 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 NKX2-6A6NCS4 301 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 GGT3PA6NGU5 568 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 HCKP08631 526 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 CFPP27918 469 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 HTR2CP28335 458 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 ETV6P41212 452 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 ASCL1P50553 236 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 NAAAQ02083 359 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 DYNC1I2Q13409 638 aaKnown RBP12.41□□□□□ -0.42
COL9A1-207ENST00000486080 SPANXN2Q5MJ10 180 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 CLVS2Q5SYC1 327 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 TMEM42Q69YG0 159 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 CNIH2Q6PI25 160 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 CRIP3Q6Q6R5 217 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 BHLHE23Q8NDY6 225 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 OR51D1Q8NGF3 324 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 OR1J1Q8NGS3 322 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 SLC25A40Q8TBP6 338 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 PIGCQ92535 297 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 PIGTQ969N2 578 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 CNTD2Q9H8S5 307 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 COQ3Q9NZJ6 369 aa12.41□□□□□ -0.42
COL9A1-207ENST00000486080 FAM208BQ5VWN6 2430 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 ZNF816-ZNF321PA0A0X1KG74 233 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 CD300LBA8K4G0 201 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 FAM25AB3EWG3 89 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 FAM25CB3EWG5 89 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 FAM25GB3EWG6 89 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 LILRA1O75019 489 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 NRASP01111 189 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 PRB1P04280 392 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 THBDP07204 575 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 ERCC1P07992 297 aaPredicted RBP12.4□□□□□ -0.42
COL9A1-207ENST00000486080 OCMP0CE72 109 aaPredicted RBP12.4□□□□□ -0.42
COL9A1-207ENST00000486080 ZNF93P35789 620 aaPredicted RBP12.4□□□□□ -0.42
COL9A1-207ENST00000486080 EVX1P49640 407 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 C1orf100Q5SVJ3 147 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 OR2T2Q6IF00 324 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 OR6M1Q8NGM8 313 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 LILRB4Q8NHJ6 448 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 UBASH3BQ8TF42 649 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 SSC4DQ8WTU2 575 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 FAM3DQ96BQ1 224 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 WDR12Q9GZL7 423 aaKnown RBP12.4□□□□□ -0.42
COL9A1-207ENST00000486080 METTL17Q9H7H0 456 aaPredicted RBP12.4□□□□□ -0.42
COL9A1-207ENST00000486080 GPR160Q9UJ42 338 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 ERRFI1Q9UJM3 462 aaPredicted RBP12.4□□□□□ -0.42
COL9A1-207ENST00000486080 V9GYH0 126 aa12.4□□□□□ -0.42
COL9A1-207ENST00000486080 ZNF850A8MQ14 1090 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 J3QW42 95 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 ALX3O95076 343 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 CALCBP10092 127 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 PRF1P14222 555 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 AZGP1P25311 298 aaKnown RBP12.39□□□□□ -0.43
COL9A1-207ENST00000486080 SNTB1Q13884 538 aaKnown RBP12.39□□□□□ -0.43
COL9A1-207ENST00000486080 C2orf76Q3KRA6 126 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 FBXW12Q6X9E4 464 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 WFDC8Q8IUA0 241 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 SNX29P2Q8IUI4 249 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 GALNT11Q8NCW6 608 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 ZFAND2BQ8WV99 257 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 RFT1Q96AA3 541 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 FOXRED1Q96CU9 486 aaPredicted RBP12.39□□□□□ -0.43
COL9A1-207ENST00000486080 CMBLQ96DG6 245 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 SLC25A38Q96DW6 304 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 WFIKKN1Q96NZ8 548 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 SORCS2Q96PQ0 1159 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 OPA3Q9H6K4 179 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 MOV10Q9HCE1 1003 aaKnown RBP12.39□□□□□ -0.43
COL9A1-207ENST00000486080 MYEF2Q9P2K5 600 aaKnown RBP12.39□□□□□ -0.43
COL9A1-207ENST00000486080 RALYQ9UKM9 306 aaKnown RBP12.39□□□□□ -0.43
COL9A1-207ENST00000486080 MAGEB3O15480 346 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 TMEM127O75204 238 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 ALDOBP05062 364 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 GRNP28799 593 aaKnown RBP12.39□□□□□ -0.43
COL9A1-207ENST00000486080 MPV17P39210 176 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 RAD52P43351 418 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 OR3A4PP47883 348 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 POU3F4P49335 361 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 EFNB2P52799 333 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 ZNF45Q02386 682 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 KISS1Q15726 138 aa12.39□□□□□ -0.43
COL9A1-207ENST00000486080 ALKBH6Q3KRA9 238 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms