RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 TET2Q6N021 2002 aaPredicted RBP2.9□□□□□ -1.95
SMARCC1-207ENST00000485833 UQCRHLA0A096LP55 91 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 B4DSR2 109 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 OR7A17O14581 309 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 PSTPIP1O43586 416 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 SPOPO43791 374 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 FMO6PO60774 539 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 PNPP00491 289 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 SDC1P18827 310 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 COX5AP20674 150 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 FUT3P21217 361 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 PTBP1P26599 531 aaKnown RBP eCLIP2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 GCKP35557 465 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 ATP6V1E1P36543 226 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 SLC1A2P43004 574 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 RAG2P55895 527 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 STXBP1P61764 594 aaKnown RBP2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 PLCXD2Q0VAA5 305 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 C9orf135Q5VTT2 229 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 DUPD1Q68J44 220 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 ZNF470Q6ECI4 717 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 NIPAL1Q6NVV3 410 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 TMIGD1Q6UXZ0 262 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 DPY19L2P2Q6ZN68 376 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 H2AFVQ71UI9 128 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 TMEM179BQ7Z7N9 219 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 CCDC170Q8IYT3 715 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 KATNAL2Q8IYT4 538 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 ST13P4Q8IZP2 240 aaPredicted RBP2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 WDR31Q8NA23 367 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 OR4K17Q8NGC6 315 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 MGARPQ8TDB4 240 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 TMEM37Q8WXS4 190 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 CTNNBL1Q8WYA6 563 aaPredicted RBP2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 PTP4A1Q93096 173 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 YIPF5Q969M3 257 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 EFHD2Q96C19 240 aaPredicted RBP2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 PANX2Q96RD6 677 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 AIF1LQ9BQI0 150 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 MS4A8Q9BY19 250 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 SLC5A7Q9GZV3 580 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 OR51B5Q9H339 312 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 MMADHCQ9H3L0 296 aaPredicted RBP2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 TPK1Q9H3S4 243 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 RPF2Q9H7B2 306 aaKnown RBP2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 PARVBQ9HBI1 364 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 LYRM4Q9HD34 91 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 PTBP2Q9UKA9 531 aaKnown RBP2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 PLLPQ9Y342 182 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 ATP6V1DQ9Y5K8 247 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 FKBP7Q9Y680 259 aa2.89□□□□□ -1.95
SMARCC1-207ENST00000485833 STARD9Q9P2P6 4700 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 LCE6AA0A183 80 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 OR5H1A6NKK0 313 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 BTNL10A8MVZ5 291 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 SCAMP2O15127 329 aaKnown RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 EFNA2O43921 213 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 SCELO95171 688 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 GYPCP04921 128 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 TPM2P07951 284 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 C1GALT1C1LP0DN25 315 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 HIST1H1TP22492 207 aaPredicted RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 COL8A2P25067 703 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 CALCRP30988 508 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 TMED10P49755 219 aaKnown RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 DSCR4P56555 118 aaPredicted RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 IL1RL1Q01638 556 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 MYL5Q02045 173 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 BAMBIQ13145 260 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 SLAMF1Q13291 335 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 PDE7AQ13946 482 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 HERPUD1Q15011 391 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 ZNHIT3Q15649 155 aaPredicted RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 ZKSCAN8Q15776 578 aaPredicted RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 ZNF674Q2M3X9 581 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 TTLL9Q3SXZ7 439 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 TRMT12Q53H54 448 aaKnown RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 TIMM23BQ5SRD1 257 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 AVPI1Q5T686 147 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 SCIMPQ6UWF3 145 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 Q6ZT83 130 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 MARCH3Q86UD3 253 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 SERPINA12Q8IW75 414 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 ZNF786Q8N393 782 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 TMCO5AQ8N6Q1 288 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 ZNF433Q8N7K0 673 aaPredicted RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 ZNF75CPQ92670 426 aaPredicted RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 C5orf30Q96GV9 206 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 CHP1Q99653 195 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 STMN4Q9H169 189 aaPredicted RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 COQ10BQ9H8M1 238 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 NGBQ9NPG2 151 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 LYARQ9NX58 379 aaKnown RBP2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 MIOXQ9UGB7 285 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 ZNF221Q9UK13 617 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 ASB4Q9Y574 426 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 NACAE9PAV3 2078 aa2.88□□□□□ -1.95
SMARCC1-207ENST00000485833 A0A0A6YYD5 115 aa2.87□□□□□ -1.95
SMARCC1-207ENST00000485833 PLPP1O14494 284 aa2.87□□□□□ -1.95
SMARCC1-207ENST00000485833 TAPBPO15533 448 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms