RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 BCL2L15Q5TBC7 163 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 FDX2Q6P4F2 183 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 LRRC28Q86X40 367 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-213ENST00000485080 CATSPERDQ86XM0 798 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 OR51E1Q8TCB6 317 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 RORBQ92753 470 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 TFAP2CQ92754 450 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 RNF166Q96A37 237 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-213ENST00000485080 MSI2Q96DH6 328 aaKnown RBP14.98□□□□□ -0.01
SREBF1-213ENST00000485080 MRPL48Q96GC5 212 aaKnown RBP14.98□□□□□ -0.01
SREBF1-213ENST00000485080 ZNF649Q9BS31 505 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 FGF20Q9NP95 211 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-213ENST00000485080 GPR84Q9NQS5 396 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 C14orf119Q9NWQ9 140 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 DCAF16Q9NXF7 216 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 TREM2Q9NZC2 230 aa14.98□□□□□ -0.01
SREBF1-213ENST00000485080 LOC100289279A0A1B0GTE1 492 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 A0A1B0GTI1 187 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 DAPL1A0PJW8 107 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 MTRF1O75570 445 aaKnown RBP14.97□□□□□ -0.01
SREBF1-213ENST00000485080 DHRS3O75911 302 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 IL2RGP31785 369 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 CDH15P55291 814 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 ACTA2P62736 377 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 ACTG2P63267 376 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 MVKQ03426 396 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 RIPK1Q13546 671 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 GALEQ14376 348 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 FAM220AQ7Z4H9 259 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 MOGAT3Q86VF5 341 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 C1orf87Q8N0U7 546 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 SYS1Q8N2H4 156 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 CCDC54Q8NEL0 328 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 SEMA6DQ8NFY4 1073 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 FBLIM1Q8WUP2 373 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 PPP1R14AQ96A00 147 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 ITPKCQ96DU7 683 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 SOX7Q9BT81 388 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 AMBNQ9NP70 447 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 TMEM160Q9NX00 188 aa14.97□□□□□ -0.01
SREBF1-213ENST00000485080 WNK2Q9Y3S1 2297 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 ZNF816-ZNF321PA0A0X1KG74 233 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 IRGMA1A4Y4 181 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 CLIC3O95833 236 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 GNALP38405 381 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 BTG1P62324 171 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 RIPPLY1Q0D2K3 151 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 FAM76BQ5HYJ3 339 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 AVPI1Q5T686 147 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 LINC01356Q8N9X3 169 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 OR52I1Q8NGK6 324 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 NRG4Q8WWG1 115 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 RAB39BQ96DA2 213 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 PAPOLGQ9BWT3 736 aaKnown RBP14.96□□□□□ -0.01
SREBF1-213ENST00000485080 TLNRD1Q9H1K6 362 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 FN3KRPQ9HA64 309 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 ACOXLQ9NUZ1 547 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 MYRFQ9Y2G1 1151 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 V9GYS6 101 aa14.96□□□□□ -0.01
SREBF1-213ENST00000485080 ANXA2P2A6NMY6 339 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 A8MV72 311 aaPredicted RBP14.95□□□□□ -0.02
SREBF1-213ENST00000485080 B4DSR2 109 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 RPP14O95059 124 aaKnown RBP14.95□□□□□ -0.02
SREBF1-213ENST00000485080 IGHV2-5P01817 119 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 DCKP27707 260 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 CFHR2P36980 270 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 MDH2P40926 338 aaKnown RBP14.95□□□□□ -0.02
SREBF1-213ENST00000485080 MRPL28Q13084 256 aaKnown RBP14.95□□□□□ -0.02
SREBF1-213ENST00000485080 ZMYND11Q15326 602 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 MPPED2Q15777 294 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 SMN1Q16637 294 aaKnown RBP14.95□□□□□ -0.02
SREBF1-213ENST00000485080 TP53I3Q53FA7 332 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 Q71RC1 249 aaPredicted RBP14.95□□□□□ -0.02
SREBF1-213ENST00000485080 DOK3Q7L591 496 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 C8orf59Q8N0T1 100 aaPredicted RBP14.95□□□□□ -0.02
SREBF1-213ENST00000485080 MUC20Q8N307 709 aaPredicted RBP14.95□□□□□ -0.02
SREBF1-213ENST00000485080 SPICQ8N5J4 248 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 OR11L1Q8NGX0 322 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 OR8S1Q8NH09 359 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 ZNF420Q8TAQ5 688 aaPredicted RBP14.95□□□□□ -0.02
SREBF1-213ENST00000485080 HAVCR2Q8TDQ0 301 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 OR5P3Q8WZ94 311 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 MICU1Q9BPX6 476 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 ZNF665Q9H7R5 613 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 ERVK13-1Q9NX77 482 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 GNG8Q9UK08 70 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 SLC22A13Q9Y226 551 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 MXRA5Q9NR99 2828 aa14.95□□□□□ -0.02
SREBF1-213ENST00000485080 TMEM210A6NLX4 147 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 H0YHG0 523 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 GNAO1P09471 354 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 IRF2P14316 349 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 CCR9P51686 369 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 OR12D2P58182 307 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 PRDX4Q13162 271 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 PRAMEF6Q5VXH4 476 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 TMEM42Q69YG0 159 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 ZDHHC23Q8IYP9 409 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 PRSS35Q8N3Z0 413 aa14.94□□□□□ -0.02
SREBF1-213ENST00000485080 OR14K1Q8NGZ2 314 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms