RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PDZD11Q5EBL8 140 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 GCSAMLQ5JQS6 135 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 ZNF678Q5SXM1 525 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 PRAMEF20Q5VT98 475 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 BZW1Q7L1Q6 419 aaKnown RBP0.95□□□□□ -2.26
SCAF11-207ENST00000484275 SLC16A14Q7RTX9 510 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 LUZP2Q86TE4 346 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 CTAGE6Q86UF2 777 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 BBS5Q8N3I7 341 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 DRAM1Q8N682 238 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 C19orf18Q8NEA5 215 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 OR6Q1Q8NGQ2 317 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 FAM81AQ8TBF8 368 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 TSEN15Q8WW01 171 aaKnown RBP0.95□□□□□ -2.26
SCAF11-207ENST00000484275 CAPSLQ8WWF8 208 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 MCUR1Q96AQ8 359 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 C8orf44Q96CB5 159 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 GSDMAQ96QA5 445 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 MYCBPQ99417 103 aaPredicted RBP0.95□□□□□ -2.26
SCAF11-207ENST00000484275 FAM192AQ9GZU8 254 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 TMEM185BQ9H7F4 350 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 TMEM165Q9HC07 324 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 PITPNC1Q9UKF7 332 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 RABL2BQ9UNT1 228 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 NINLQ9Y2I6 1382 aa0.95□□□□□ -2.26
SCAF11-207ENST00000484275 A0A075B6Q4 140 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 TRBV9A0A0B4J1U6 114 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 IGHV3OR16-9A0A0B4J2B5 98 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 A6NDN8 102 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 M0R1X1 148 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 GABRPO00591 440 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 LSM1O15116 133 aaKnown RBP0.94□□□□□ -2.26
SCAF11-207ENST00000484275 ZNF73O43830 326 aaPredicted RBP0.94□□□□□ -2.26
SCAF11-207ENST00000484275 ERLIN1O75477 346 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 IGKV1-39P01597 117 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 IGKV1D-39P04432 117 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 OR1E1P30953 314 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 MRPL19P49406 292 aaKnown RBP0.94□□□□□ -2.26
SCAF11-207ENST00000484275 TRAM2Q15035 370 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 PSMD5Q16401 504 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 MRPL23Q16540 153 aaKnown RBP0.94□□□□□ -2.26
SCAF11-207ENST00000484275 HSDL1Q3SXM5 330 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 HSP90AB3PQ58FF7 597 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 SPANXN2Q5MJ10 180 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 LDLRAD2Q5SZI1 272 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 LRRC66Q68CR7 880 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 SPESP1Q6UW49 350 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 SSX9Q7RTT3 188 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 BBS7Q8IWZ6 715 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 LYPD6BQ8NI32 183 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 OTUB2Q96DC9 234 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 KCNS3Q9BQ31 491 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 ZYG11BQ9C0D3 744 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 VSIRQ9H7M9 311 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 RETNQ9HD89 108 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 RBFOX1Q9NWB1 397 aaKnown RBP0.94□□□□□ -2.26
SCAF11-207ENST00000484275 RAB20Q9NX57 234 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 LYARQ9NX58 379 aaKnown RBP0.94□□□□□ -2.26
SCAF11-207ENST00000484275 MTCH1Q9NZJ7 389 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 SLC17A4Q9Y2C5 497 aa0.94□□□□□ -2.26
SCAF11-207ENST00000484275 CACNG3O60359 315 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 CDH16O75309 829 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 CCNB2O95067 398 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 IGHV1-46P01743 117 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 PGA4P0DJD7 388 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 PGA3P0DJD8 388 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 PGA5P0DJD9 388 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 BCKDHBP21953 392 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 GTF2E2P29084 291 aaKnown RBP0.93□□□□□ -2.26
SCAF11-207ENST00000484275 HMOX2P30519 316 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 UQCRFS1P47985 274 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 RPS15P62841 145 aaKnown RBP0.93□□□□□ -2.26
SCAF11-207ENST00000484275 BEX3Q00994 111 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 IL5RAQ01344 420 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 LIPEQ05469 1076 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 MERTKQ12866 999 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 SELENBP1Q13228 472 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 CD300LGQ6UXG3 332 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 ORMDL3Q8N138 153 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 GABRG1Q8N1C3 465 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 SLC25A29Q8N8R3 303 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 TTC29Q8NA56 475 aaPredicted RBP0.93□□□□□ -2.26
SCAF11-207ENST00000484275 OR9G4Q8NGQ1 327 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 OR5K2Q8NHB8 316 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 S100PBPQ96BU1 408 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 PDCD1LG2Q9BQ51 273 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 MS4A8Q9BY19 250 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 CLSTN2Q9H4D0 955 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 ANKRA2Q9H9E1 313 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 MRM3Q9HC36 420 aaKnown RBP0.93□□□□□ -2.26
SCAF11-207ENST00000484275 ZNF160Q9HCG1 818 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 CA10Q9NS85 328 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 C20orf96Q9NUD7 363 aaPredicted RBP0.93□□□□□ -2.26
SCAF11-207ENST00000484275 HMGXB4Q9UGU5 601 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 SAR1BQ9Y6B6 198 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 NUP205Q92621 2012 aa0.93□□□□□ -2.26
SCAF11-207ENST00000484275 TMEM131Q92545 1883 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 KCNE1BA0A087WTH5 132 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 CCL15-CCL14A0A0B4J2E2 113 aa0.92□□□□□ -2.26
SCAF11-207ENST00000484275 KBTBD11-OT1A0A1B0GTJ5 212 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms