RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 C14orf79Q96F83 325 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 RADILQ96JH8 1075 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 C1QTNF6Q9BXI9 259 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 MMP27Q9H306 513 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 TPK1Q9H3S4 243 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 ZCCHC4Q9H5U6 513 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 RNF167Q9H6Y7 350 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 TMEM138Q9NPI0 162 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 ZNF319Q9P2F9 582 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 PIGLQ9Y2B2 252 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 V9GY05 133 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 ZNF816-ZNF321PA0A0X1KG74 233 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 hCG_38984A0A1B0GV85 526 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 ANKRD61A6NGH8 418 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 GGT3PA6NGU5 568 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 C19orf84I3L1E1 186 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 SMPD2O60906 423 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 RAC2P15153 192 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 GSK3AP49840 483 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 SELENOVP59797 346 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 PPP1CBP62140 327 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 FAM3AP98173 230 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 NAAAQ02083 359 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 ZNF92Q03936 586 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 HGFACQ04756 655 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 MXD1Q05195 221 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 GK2Q14410 553 aaPredicted RBP12.05□□□□□ -0.48
SMAD9-204ENST00000483941 INSL4Q14641 139 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 ZNF718Q3SXZ3 478 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 FBXW12Q6X9E4 464 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 OR10AC1Q8NH08 325 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 PIGTQ969N2 578 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 LYZL4Q96KX0 146 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 DACH2Q96NX9 599 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 ESRP2Q9H6T0 727 aaKnown RBP12.05□□□□□ -0.48
SMAD9-204ENST00000483941 STARD10Q9Y365 291 aa12.05□□□□□ -0.48
SMAD9-204ENST00000483941 NOP16Q9Y3C1 178 aaKnown RBP12.05□□□□□ -0.48
SMAD9-204ENST00000483941 VPS13CQ709C8 3753 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 A0A075B6Q4 140 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 IGHV2OR16-5A0A0B4J2B6 119 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 ANKRD30BLA7E2S9 258 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 PIN1P1O15428 100 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 SULT1B1O43704 296 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 ALDOBP05062 364 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 CELA3BP08861 270 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 IGFBP3P17936 291 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-204ENST00000483941 PRKACBP22694 351 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 CD40P25942 277 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 BDKRB2P30411 391 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 GCH1P30793 250 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 CCKARP32238 428 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 S100A5P33763 92 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 WNT5AP41221 380 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 TLE4Q04727 773 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 HNRNPA0Q13151 305 aaKnown RBP12.04□□□□□ -0.48
SMAD9-204ENST00000483941 CNN3Q15417 329 aaKnown RBP12.04□□□□□ -0.48
SMAD9-204ENST00000483941 MOGQ16653 247 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 CLVS2Q5SYC1 327 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 FAM27D1Q5T7N8 215 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 ALKBH2Q6NS38 261 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 OR1M1Q8NGA1 313 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 OR1J1Q8NGS3 322 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 OR2AE1Q8NHA4 323 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 MCFD2Q8NI22 146 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 SPSB1Q96BD6 273 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 HIST1H2AAQ96QV6 131 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 CHST5Q9GZS9 411 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 SLC22A4Q9H015 551 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 PPIL3Q9H2H8 161 aaKnown RBP12.04□□□□□ -0.48
SMAD9-204ENST00000483941 PTTG3PQ9NZH4 202 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 KCNN3Q9UGI6 736 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 SLC7A11Q9UPY5 501 aa12.04□□□□□ -0.48
SMAD9-204ENST00000483941 TUBAL3A6NHL2 446 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 CLPXO76031 633 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 CST4P01036 141 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 NGFP01138 241 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 MAS1P04201 325 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 HOXB4P17483 251 aaPredicted RBP12.03□□□□□ -0.48
SMAD9-204ENST00000483941 GLRXP35754 106 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 TGFBR1P36897 503 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 SCAND1P57086 179 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 SFXN4Q6P4A7 337 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 KRT74Q7RTS7 529 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 WFDC8Q8IUA0 241 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 ZNF101Q8IZC7 436 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 PAQR4Q8N4S7 273 aaPredicted RBP12.03□□□□□ -0.48
SMAD9-204ENST00000483941 PNLDC1Q8NA58 520 aaKnown RBP12.03□□□□□ -0.48
SMAD9-204ENST00000483941 TSC22D3Q99576 134 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 UQCC2Q9BRT2 126 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 SLIRPQ9GZT3 109 aaKnown RBP12.03□□□□□ -0.48
SMAD9-204ENST00000483941 TAS2R4Q9NYW5 299 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 ABRACLQ9P1F3 81 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 ADAM30Q9UKF2 790 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 PEX16Q9Y5Y5 336 aa12.03□□□□□ -0.48
SMAD9-204ENST00000483941 NKX2-6A6NCS4 301 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 CD300LBA8K4G0 201 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 H3BSH0 61 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 AIPO00170 330 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 NRASP01111 189 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 FAM157BP0CG42 384 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms