RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DYRK2Q92630 601 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 ATP6V1G3Q96LB4 118 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF583Q96ND8 569 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 TECTBQ96PL2 329 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 COQ7Q99807 217 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 CITED1Q99966 193 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 PCGF1Q9BSM1 259 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 CHIAQ9BZP6 476 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 TRIM15Q9C019 465 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 HDHD2Q9H0R4 259 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 SYT4Q9H2B2 425 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 MMADHCQ9H3L0 296 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 NMNAT1Q9HAN9 279 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 SEPSECSQ9HD40 501 aaKnown RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 KRCC1Q9NPI7 259 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 TRIM36Q9NQ86 728 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 C1RLQ9NZP8 487 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 PDP1Q9P0J1 537 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-207ENST00000483407 ERVK-18Q9QC07 812 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 RHCGQ9UBD6 479 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 TMEM5Q9Y2B1 443 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 AP3M1Q9Y2T2 418 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 ADAM18Q9Y3Q7 739 aa4.87□□□□□ -1.63
CSDE1-207ENST00000483407 ARHGAP32A7KAX9 2087 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 TRGV11A0A075B6L2 103 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 A0A087WUU8 490 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 TRAV38-1A0A0B4J264 116 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF879B4DU55 563 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 H0YL77 283 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 SOCS2O14508 198 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 CDC42EP2O14613 210 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 TNFRSF13BO14836 293 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-207ENST00000483407 MLNRO43193 412 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 NDUFA2O43678 99 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 EDF1O60869 148 aaKnown RBP4.86□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF682O95780 498 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 TK1P04183 234 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 HLA-DPB1P04440 258 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 MELTFP08582 738 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 CFHR2P36980 270 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 PSMB10P40306 273 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 PMELP40967 661 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 CD200P41217 278 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 RPS6KA3P51812 740 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 ECH1Q13011 328 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 TAF9Q16594 264 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 IFI44LQ53G44 452 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 METTL11BQ5VVY1 283 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 OTPQ5XKR4 325 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 RUSC1-AS1Q66K80 236 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 LYPD2Q6UXB3 125 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 PGAP1Q75T13 922 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 MRPL21Q7Z2W9 205 aaKnown RBP4.86□□□□□ -1.63
CSDE1-207ENST00000483407 ARPINQ7Z6K5 226 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-207ENST00000483407 SCCPDHQ8NBX0 429 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 SPRYD4Q8WW59 207 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-207ENST00000483407 GPX7Q96SL4 187 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-207ENST00000483407 PKP2Q99959 881 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 RBM4BQ9BQ04 359 aaKnown RBP4.86□□□□□ -1.63
CSDE1-207ENST00000483407 SLC22A4Q9H015 551 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 NUAK2Q9H093 628 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 DPAGT1Q9H3H5 408 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 ANKRD19PQ9H560 264 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 WDR76Q9H967 626 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 FN3KRPQ9HA64 309 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 NRIP3Q9NQ35 241 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 ACOXLQ9NUZ1 547 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 RNF7Q9UBF6 113 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 RPS6KA6Q9UK32 745 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 TMCC3Q9ULS5 477 aa4.86□□□□□ -1.63
CSDE1-207ENST00000483407 FAM32AQ9Y421 112 aaKnown RBP4.86□□□□□ -1.63
CSDE1-207ENST00000483407 IGHV1-69DA0A0B4J2H0 117 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 CENPVL3A0A0U1RRI6 287 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 LOC100653049A0A140TA62 436 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 A0A1B0GWJ7 208 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 BTBD17A6NE02 478 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 F5H5K5 113 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 J3KRW8 73 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 LGALS8O00214 317 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 FFAR1O14842 300 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 ADAM20O43506 726 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 GPR137BO60478 399 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 FAM20BO75063 409 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 KRT34O76011 436 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 CLPXO76031 633 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 ECDO95905 644 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-207ENST00000483407 RENP00797 406 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 IGHV1-69P01742 117 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 LCATP04180 440 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 SFTPBP07988 381 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 TROVE2P10155 538 aaKnown RBP eCLIP4.85□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF26P17031 533 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-207ENST00000483407 GGT2P36268 569 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 MDH1P40925 334 aaKnown RBP4.85□□□□□ -1.63
CSDE1-207ENST00000483407 HIST1H3AP68431 136 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 MZT1Q08AG7 82 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 COX10Q12887 443 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 KLF10Q13118 480 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms