RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 RCN3Q96D15 328 aa10.46□□□□□ -0.73
TMEM54-206ENST00000482771 CLPTM1LQ96KA5 538 aa10.46□□□□□ -0.73
TMEM54-206ENST00000482771 ELAC2Q9BQ52 826 aaKnown RBP10.46□□□□□ -0.73
TMEM54-206ENST00000482771 OR52D1Q9H346 318 aa10.46□□□□□ -0.73
TMEM54-206ENST00000482771 KRCC1Q9NPI7 259 aaPredicted RBP10.46□□□□□ -0.73
TMEM54-206ENST00000482771 SNTG1Q9NSN8 517 aa10.46□□□□□ -0.73
TMEM54-206ENST00000482771 CENPMQ9NSP4 180 aa10.46□□□□□ -0.73
TMEM54-206ENST00000482771 KCNG2Q9UJ96 466 aa10.46□□□□□ -0.73
TMEM54-206ENST00000482771 CAPN7Q9Y6W3 813 aa10.46□□□□□ -0.73
TMEM54-206ENST00000482771 TENM3Q9P273 2699 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 CDIPTO14735 213 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 SELLP14151 372 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 NCK1P16333 377 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 OTX1P32242 354 aaPredicted RBP10.45□□□□□ -0.74
TMEM54-206ENST00000482771 DDOSTP39656 456 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 ACSM1Q08AH1 577 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 VAX1Q5SQQ9 334 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 PGBD2Q6P3X8 592 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 PIGWQ7Z7B1 504 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 SDR9C7Q8NEX9 313 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 C8orf46Q8TAG6 207 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 FANK1Q8TC84 345 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 SGK3Q96BR1 496 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 C12orf43Q96C57 262 aaKnown RBP10.45□□□□□ -0.74
TMEM54-206ENST00000482771 COPS4Q9BT78 406 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 PPP1R3EQ9H7J1 279 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 METTL8Q9H825 291 aaKnown RBP10.45□□□□□ -0.74
TMEM54-206ENST00000482771 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.45□□□□□ -0.74
TMEM54-206ENST00000482771 AURKAIP1Q9NWT8 199 aaPredicted RBP10.45□□□□□ -0.74
TMEM54-206ENST00000482771 HAO2Q9NYQ3 351 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 ZNF391Q9UJN7 358 aa10.45□□□□□ -0.74
TMEM54-206ENST00000482771 SF3B6Q9Y3B4 125 aaKnown RBP10.45□□□□□ -0.74
TMEM54-206ENST00000482771 IDH3BO43837 385 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 TFF1P04155 84 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 NDUFB7P17568 137 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 PAX6P26367 422 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 FAM3AP98173 230 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 BLMHQ13867 455 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 KRT72Q14CN4 511 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 NCR3LG1Q68D85 454 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 DCXRQ7Z4W1 244 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 ARPINQ7Z6K5 226 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 OR4S1Q8NGB4 309 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 OR51L1Q8NGJ5 315 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 OR51G2Q8NGK0 314 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 ZNRF4Q8WWF5 429 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 R3HDM4Q96D70 268 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 DUS3LQ96G46 650 aaKnown RBP10.44□□□□□ -0.74
TMEM54-206ENST00000482771 MED30Q96HR3 178 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 AJUBAQ96IF1 538 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 C7orf34Q96L11 122 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 KCNJ15Q99712 375 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 FUZQ9BT04 418 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 FAM107BQ9H098 131 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 MYLK2Q9H1R3 596 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 MEGF9Q9H1U4 602 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 WDR13Q9H1Z4 485 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 MMP28Q9H239 520 aa10.44□□□□□ -0.74
TMEM54-206ENST00000482771 A0A1W2PQ09 198 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 M0R1W7 72 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 NME4O00746 187 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 TBX1O43435 398 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 XRCC2O43543 280 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 VSIG8P0DPA2 414 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 CD28P10747 220 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 PSKH1P11801 424 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 GSK3BP49841 420 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 SLC7A2P52569 658 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.43□□□□□ -0.74
TMEM54-206ENST00000482771 DGUOKQ16854 277 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 LRRC75BQ2VPJ9 315 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 STUMQ69YW2 141 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 HCP5Q6MZN7 132 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 CRIP3Q6Q6R5 217 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 LYPD4Q6UWN0 246 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 SLC16A9Q7RTY1 509 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 CYB561A3Q8NBI2 242 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 PROKR2Q8NFJ6 384 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 OR4C15Q8NGM1 316 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 RP9Q8TA86 221 aaKnown RBP10.43□□□□□ -0.74
TMEM54-206ENST00000482771 SPSB4Q96A44 273 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 DDOQ99489 341 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 NKX3-1Q99801 234 aaPredicted RBP10.43□□□□□ -0.74
TMEM54-206ENST00000482771 HOPXQ9BPY8 73 aaPredicted RBP10.43□□□□□ -0.74
TMEM54-206ENST00000482771 OPA3Q9H6K4 179 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 RAB18Q9NP72 206 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 SLC25A10Q9UBX3 287 aaPredicted RBP10.43□□□□□ -0.74
TMEM54-206ENST00000482771 ARL2BPQ9Y2Y0 163 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 RHBDD3Q9Y3P4 386 aa10.43□□□□□ -0.74
TMEM54-206ENST00000482771 H0YAE9 185 aa10.42□□□□□ -0.74
TMEM54-206ENST00000482771 ZNF593O00488 134 aaPredicted RBP10.42□□□□□ -0.74
TMEM54-206ENST00000482771 ANGPTL7O43827 346 aa10.42□□□□□ -0.74
TMEM54-206ENST00000482771 TIPRLO75663 272 aa10.42□□□□□ -0.74
TMEM54-206ENST00000482771 MPIG6BO95866 241 aa10.42□□□□□ -0.74
TMEM54-206ENST00000482771 FAM107AO95990 144 aa10.42□□□□□ -0.74
TMEM54-206ENST00000482771 TIGD6Q17RP2 521 aa10.42□□□□□ -0.74
TMEM54-206ENST00000482771 ZBTB37Q5TC79 503 aa10.42□□□□□ -0.74
TMEM54-206ENST00000482771 FOXB2Q5VYV0 432 aa10.42□□□□□ -0.74
TMEM54-206ENST00000482771 ZNF788Q6ZQV5 615 aa10.42□□□□□ -0.74
TMEM54-206ENST00000482771 ZDHHC21Q8IVQ6 265 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms