RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ZNF878C9JN71 531 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 LDLRAD4O15165 306 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 B3GALNT1O75752 331 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 WISP2O76076 250 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 UBCP0CG48 685 aaKnown RBP12.69□□□□□ -0.38
CHD3-211ENST00000481999 B4GALT1P15291 398 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 UBE2MP61081 183 aaKnown RBP12.69□□□□□ -0.38
CHD3-211ENST00000481999 C9orf135Q5VTT2 229 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 C11orf88Q6PI97 169 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 KLHL24Q6TFL4 600 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 TMUB2Q71RG4 321 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 OR4D6Q8NGJ1 314 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 OR1J2Q8NGS2 313 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 RBPMSQ93062 196 aaKnown RBP12.69□□□□□ -0.38
CHD3-211ENST00000481999 POFUT1Q9H488 388 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 ZNF224Q9NZL3 707 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 KCNN3Q9UGI6 736 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 LIPGQ9Y5X9 500 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 FXYD6-FXYD2A0A087WZ82 144 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 LOC390937A0A1W2PQ73 354 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 TMEM82A0PJX8 343 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 H3BUI4 141 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 SYT7O43581 403 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 PPP3CBP16298 524 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 FKBP2P26885 142 aaKnown RBP12.68□□□□□ -0.38
CHD3-211ENST00000481999 CX3CR1P49238 355 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 GALNT16Q8N428 558 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 TMEM251Q8N6I4 163 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 OR52N4Q8NGI2 321 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 OR13C9Q8NGT0 318 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 TMEM54Q969K7 222 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 FOXRED1Q96CU9 486 aaPredicted RBP12.68□□□□□ -0.38
CHD3-211ENST00000481999 FAM122AQ96E09 287 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 FXYD6Q9H0Q3 95 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 ANKRD11Q6UB99 2663 aaPredicted RBP12.68□□□□□ -0.38
CHD3-211ENST00000481999 NBEAQ8NFP9 2946 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 RELNP78509 3460 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 DHHO43323 396 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 CYB5AP00167 134 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 SLC6A9P48067 706 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 PMPCAQ10713 525 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 AIMP2Q13155 320 aaKnown RBP12.68□□□□□ -0.38
CHD3-211ENST00000481999 RSPO1Q2MKA7 263 aaPredicted RBP12.68□□□□□ -0.38
CHD3-211ENST00000481999 SFRP5Q5T4F7 317 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 OR2V1Q8NHB1 315 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 FAM46BQ96A09 425 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 NAA11Q9BSU3 229 aaPredicted RBP12.68□□□□□ -0.38
CHD3-211ENST00000481999 CHST6Q9GZX3 395 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 ARL6Q9H0F7 186 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 MYOZ1Q9NP98 299 aaPredicted RBP12.68□□□□□ -0.38
CHD3-211ENST00000481999 GPR84Q9NQS5 396 aa12.68□□□□□ -0.38
CHD3-211ENST00000481999 A0A1B0GTI1 187 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 hCG_1807616A0A1W2PRN6 198 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 ZNF736B4DX44 427 aaPredicted RBP12.67□□□□□ -0.38
CHD3-211ENST00000481999 TLX3O43711 291 aaPredicted RBP12.67□□□□□ -0.38
CHD3-211ENST00000481999 AMY2AP04746 511 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 RAB6AP20340 208 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 MSR1P21757 451 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 PLA2G5P39877 138 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 PMP22Q01453 160 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 DCAF12L2Q5VW00 463 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 ZNF283Q8N7M2 679 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 FGFBP3Q8TAT2 258 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 FAM173AQ9BQD7 235 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 NELFAQ9H3P2 528 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 MED9Q9NWA0 146 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 BOKQ9UMX3 212 aaPredicted RBP12.67□□□□□ -0.38
CHD3-211ENST00000481999 CD74P04233 296 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 OR4E1P0C645 316 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 CALCRP30988 508 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 MOGAT2Q3SYC2 334 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 RNFT1Q5M7Z0 435 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 RAB12Q6IQ22 244 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.67□□□□□ -0.38
CHD3-211ENST00000481999 C12orf45Q8N5I9 185 aaPredicted RBP12.67□□□□□ -0.38
CHD3-211ENST00000481999 FNDC9Q8TBE3 224 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 SCARB1Q8WTV0 552 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 TINAGL1Q9GZM7 467 aaPredicted RBP12.67□□□□□ -0.38
CHD3-211ENST00000481999 ASCL3Q9NQ33 180 aa12.67□□□□□ -0.38
CHD3-211ENST00000481999 RP1L1Q8IWN7 2480 aaPredicted RBP12.67□□□□□ -0.38
CHD3-211ENST00000481999 PTPRBP23467 1997 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 METTL21EPA6NDL7 271 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 GJE1A6NN92 205 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 M0QYG6 137 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 VAMP5O95183 116 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 CASRP41180 1078 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 LHX2P50458 406 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 FOXG1P55316 489 aaPredicted RBP12.66□□□□□ -0.38
CHD3-211ENST00000481999 GLRX5Q86SX6 157 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 LYPD6Q86Y78 171 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 NPRL2Q8WTW4 380 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 CCDC120Q96HB5 630 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 CNTD2Q9H8S5 307 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 ZZEF1O43149 2961 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 PLGLB1Q02325 96 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 HGFACQ04756 655 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 CLVS2Q5SYC1 327 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 C10orf128Q5T292 105 aa12.66□□□□□ -0.38
CHD3-211ENST00000481999 GSG1LQ6UXU4 331 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms