RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 ALPLP05186 524 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 DUX4L2P0CJ85 424 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 DUX4L3P0CJ86 424 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 DUX4L4P0CJ87 422 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 DUX4L5P0CJ88 424 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 DUX4L6P0CJ89 424 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 DUX4L7P0CJ90 424 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 THBS2P35442 1172 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 GATA4P43694 442 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 SLC15A1P46059 708 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 PSMA6P60900 246 aaKnown RBP9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 KRTAP24-1Q3LI83 254 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 DUX4L9Q6RFH8 374 aaPredicted RBP9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 ZNF554Q86TJ5 538 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 SLC35F2Q8IXU6 374 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 CBR4Q8N4T8 237 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 OR51G2Q8NGK0 314 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 EME1Q96AY2 570 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 OR8B4Q96RC9 309 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 CNN2Q99439 309 aaKnown RBP9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 OR10A2Q9H208 303 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 TOR3AQ9H497 397 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 PATZ1Q9HBE1 687 aaKnown RBP9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 C8orf4Q9NR00 106 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 C1orf123Q9NWV4 160 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 MRPL15Q9P015 296 aaKnown RBP9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 DUX4Q9UBX2 424 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 LPAR3Q9UBY5 353 aa9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 MRM2Q9UI43 246 aaKnown RBP9.54□□□□□ -0.88
RAPGEF1-207ENST00000481260 TRAV20A0A0B4J274 112 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 H3BSH0 61 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 XRCC2O43543 280 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 PTBP3O95758 552 aaKnown RBP9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 WNT2P09544 360 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 SRP14P37108 136 aaKnown RBP9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 MDH2P40926 338 aaKnown RBP9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 SLC3A1Q07837 685 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 TMEM155Q4W5P6 130 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 NXNL2Q5VZ03 156 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 KRT77Q7Z794 578 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 PEG10Q86TG7 708 aaKnown RBP9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 PHC2Q8IXK0 858 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 Q8TCH9 128 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 HPSE2Q8WWQ2 592 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 RNF166Q96A37 237 aaPredicted RBP9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 RAB39BQ96DA2 213 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 CTSZQ9UBR2 303 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 RSL24D1Q9UHA3 163 aaKnown RBP9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 CEPT1Q9Y6K0 416 aa9.53□□□□□ -0.88
RAPGEF1-207ENST00000481260 A6NIN4 97 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 ZNF850A8MQ14 1090 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 PFDN1O60925 122 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 ENTPD6O75354 484 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 GMFBP60983 142 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 CXCR4P61073 352 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 PAX2Q02962 417 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 ROM1Q03395 351 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 OR8B8Q15620 311 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 ZNF404Q494X3 552 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 KCTD21Q4G0X4 260 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 ZNF322Q6U7Q0 402 aaPredicted RBP9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 ZNF841Q6ZN19 808 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 KLBQ86Z14 1044 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 PACRGLQ8N7B6 248 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 OR51E1Q8TCB6 317 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 C22orf15Q8WYQ4 148 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 RPL3LQ92901 407 aaKnown RBP9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 ITPKCQ96DU7 683 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 FAM71F1Q96KD3 344 aaPredicted RBP9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 RBM4BQ9BQ04 359 aaKnown RBP9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 PAPOLGQ9BWT3 736 aaKnown RBP9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 TEX12Q9BXU0 123 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 PBOV1Q9GZY1 135 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 PLGRKTQ9HBL7 147 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 GPR84Q9NQS5 396 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 USE1Q9NZ43 259 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 IKZF2Q9UKS7 526 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 PCDHB10Q9UN67 800 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 SLC22A13Q9Y226 551 aa9.52□□□□□ -0.89
RAPGEF1-207ENST00000481260 PPIAL4EA0A075B759 164 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 IGHV3OR16-10A0A075B7F0 116 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 TMEM269A0A1B0GVZ9 245 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 A0A1W2PQL4 384 aaPredicted RBP9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 A6NLC8 198 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 ANKRD30BLA7E2S9 258 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 RNF212BA8MTL3 300 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 C22orf46C9J442 243 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 PPIAL4DF5H284 164 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 TNFRSF13BO14836 293 aaPredicted RBP9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 GMDSO60547 372 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 RPP14O95059 124 aaKnown RBP9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 IGLV3-1P01715 115 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 GYPAP02724 150 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 TTRP02766 147 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 PPIAL4FP0DN26 164 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 RPS2P15880 293 aaKnown RBP9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 HTR1FP30939 366 aa9.51□□□□□ -0.89
RAPGEF1-207ENST00000481260 ZNF85Q03923 595 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms