RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 DACT3Q96B18 629 aaPredicted RBP9.55□□□□□ -0.88
CCM2-213ENST00000480658 TLNRD1Q9H1K6 362 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCM2-213ENST00000480658 CAB39Q9Y376 341 aaPredicted RBP9.55□□□□□ -0.88
CCM2-213ENST00000480658 N6AMT1Q9Y5N5 214 aa9.55□□□□□ -0.88
CCM2-213ENST00000480658 TRAV40A0A0B4J280 105 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 ZNF816-ZNF321PA0A0X1KG74 233 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 A0A1B0GUS0 222 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 NKX6-3A6NJ46 265 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 TMPRSS2O15393 492 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 ZNF205O95201 554 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 LHBP01229 141 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 GRPP07492 148 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 HKR1P10072 659 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 SLC2A1P11166 492 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 CFPP27918 469 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 CD80P33681 288 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 MAP2K3P46734 347 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 IL13RA1P78552 427 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 SRSF2Q01130 221 aaKnown RBP9.54□□□□□ -0.88
CCM2-213ENST00000480658 POU4F2Q12837 409 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 MPPED2Q15777 294 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 SNAPC1Q16533 368 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 GFOD2Q3B7J2 385 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 LRRC10Q5BKY1 277 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 SPATC1Q76KD6 591 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 PRSS45Q7RTY3 260 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 ZDHHC13Q8IUH4 622 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 CPOQ8IVL8 374 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 GID4Q8IVV7 300 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 ZDHHC23Q8IYP9 409 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 IQCF1Q8N6M8 205 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 SIGLECL1Q8N7X8 197 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 ZDHHC22Q8N966 263 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 OR1M1Q8NGA1 313 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 OR5K1Q8NHB7 308 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 NPRL2Q8WTW4 380 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 ZNRF4Q8WWF5 429 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 GATAD2BQ8WXI9 593 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 SGK3Q96BR1 496 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 FAM71F1Q96KD3 344 aaPredicted RBP9.54□□□□□ -0.88
CCM2-213ENST00000480658 CNN2Q99439 309 aaKnown RBP9.54□□□□□ -0.88
CCM2-213ENST00000480658 KRT84Q9NSB2 600 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 DNAJC27Q9NZQ0 273 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 H2AFY2Q9P0M6 372 aaPredicted RBP9.54□□□□□ -0.88
CCM2-213ENST00000480658 KPTNQ9Y664 436 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 POMT1Q9Y6A1 747 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 ANK2Q01484 3957 aa9.54□□□□□ -0.88
CCM2-213ENST00000480658 A0A1B0GVI7 797 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 DNAJC9-AS1A6NH13 148 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 OR5B21A6NL26 309 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 DHRS7CA6NNS2 312 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 POM121CA8CG34 1229 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 C3orf80F5H4A9 247 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 G3V2T6 193 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 RGS9O75916 674 aaPredicted RBP9.53□□□□□ -0.88
CCM2-213ENST00000480658 TOX4O94842 621 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 ALOX5APP20292 161 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 FASP25445 335 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 PMELP40967 661 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 RIDAP52758 137 aaKnown RBP9.53□□□□□ -0.88
CCM2-213ENST00000480658 CRISP1P54107 249 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 PRSS12P56730 875 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 ROM1Q03395 351 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 NXNL2Q5VZ03 156 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 FAHD1Q6P587 224 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 SHISA2Q6UWI4 295 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 ZNF841Q6ZN19 808 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 ZNF679Q8IYX0 411 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 GCSAMQ8N6F7 178 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 KIR3DL3Q8N743 410 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 LRRC29Q8WV35 223 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 ZDHHC16Q969W1 377 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 ITPKCQ96DU7 683 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 MED30Q96HR3 178 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 MYCBPQ99417 103 aaPredicted RBP9.53□□□□□ -0.88
CCM2-213ENST00000480658 DNAJB11Q9UBS4 358 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 ZNF69Q9UC07 566 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 LRP12Q9Y561 859 aa9.53□□□□□ -0.88
CCM2-213ENST00000480658 IGHV3-64DA0A0J9YX35 117 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 TMEM269A0A1B0GVZ9 245 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 A0A1W2PPH5 198 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 SRRM5B3KS81 715 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 GSC2O15499 205 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 NDUFB3O43676 98 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 SELENOFO60613 162 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 PSKH1P11801 424 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 SLC2A5P22732 501 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 FGF12P61328 243 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 EGR3Q06889 387 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 PRDX4Q13162 271 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 APOFQ13790 326 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 ATP6AP1Q15904 470 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 CDONQ4KMG0 1287 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 FAM76BQ5HYJ3 339 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 KLF17Q5JT82 389 aaPredicted RBP9.52□□□□□ -0.89
CCM2-213ENST00000480658 SFRP4Q6FHJ7 346 aaPredicted RBP9.52□□□□□ -0.89
CCM2-213ENST00000480658 WDR82Q6UXN9 313 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 KCTD8Q6ZWB6 473 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms