RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 HBG1P69891 147 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 HBG2P69892 147 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 ZNF79Q15937 498 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 ETFDHQ16134 617 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 PDLIM3Q53GG5 364 aaPredicted RBP12.83□□□□□ -0.36
COL20A1-206ENST00000479501 SFRP5Q5T4F7 317 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 SHEQ5VZ18 495 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 WDR5BQ86VZ2 330 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 LGI3Q8N145 548 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 C12orf49Q9H741 205 aa12.83□□□□□ -0.36
COL20A1-206ENST00000479501 ZFP92A6NM28 416 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 PYCARD-AS1I3L0S3 204 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 IRF2P14316 349 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 IL2RGP31785 369 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 CLDN15P56746 228 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 ERVK-16P61578 105 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 ST3GAL2Q16842 350 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 ATPAF1Q5TC12 328 aaPredicted RBP12.82□□□□□ -0.36
COL20A1-206ENST00000479501 GALNT16Q8N428 558 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 OR13C8Q8NGS7 320 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 NXF2Q9GZY0 626 aaKnown RBP12.82□□□□□ -0.36
COL20A1-206ENST00000479501 CEBPZOSA8MTT3 80 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 SDCBPO00560 298 aaPredicted RBP12.82□□□□□ -0.36
COL20A1-206ENST00000479501 PHLDA2Q53GA4 152 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 COL13A1Q5TAT6 717 aaPredicted RBP12.82□□□□□ -0.36
COL20A1-206ENST00000479501 ADGRG3Q86Y34 549 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 MENTQ9BUN1 341 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 MPZL1O95297 269 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 ECI1P42126 302 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.82□□□□□ -0.36
COL20A1-206ENST00000479501 GLDNQ6ZMI3 551 aaPredicted RBP12.82□□□□□ -0.36
COL20A1-206ENST00000479501 C1orf87Q8N0U7 546 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 OR51A4Q8NGJ6 313 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 BTF3L4Q96K17 158 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 DLL4Q9NR61 685 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 ZSWIM8A7E2V4 1837 aa12.82□□□□□ -0.36
COL20A1-206ENST00000479501 PLSCR5A0PG75 271 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 ZNF250P15622 560 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 HRH1P35367 487 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 RFC3P40938 356 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 RAG2P55895 527 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 MSMO1Q15800 293 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 TAF9Q16594 264 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 ELFN2Q5R3F8 820 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 OR51A2Q8NGJ7 313 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 OR5M8Q8NGP6 311 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 IP6K3Q96PC2 410 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 NECAP2Q9NVZ3 263 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 MTFP1Q9UDX5 166 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 SCN5AQ14524 2016 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 TBPP20226 339 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 CCL11P51671 97 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 ANKRD16Q6P6B7 361 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 ROBO4Q8WZ75 1007 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 TRAPPC2LQ9UL33 140 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 CACNA1EQ15878 2313 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 PPP5D1E7EU14 171 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 IL5P05113 134 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 CD37P11049 281 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 B4GALT1P15291 398 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 PI3P19957 117 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 SLC6A1P30531 599 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 FCGR2CP31995 323 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 LRRTM1Q86UE6 522 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 OR51F2Q8NH61 342 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 ALKBH3Q96Q83 286 aaPredicted RBP12.81□□□□□ -0.36
COL20A1-206ENST00000479501 SLC17A5Q9NRA2 495 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 RER1O15258 196 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 PLA2G10O15496 165 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 NRASP01111 189 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 GSTP1P09211 210 aaKnown RBP12.81□□□□□ -0.36
COL20A1-206ENST00000479501 FAHP16930 419 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 F2RL1P55085 397 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 SMUG1Q53HV7 270 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 PLXDC2Q6UX71 529 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 EXD3Q8N9H8 876 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 SEH1LQ96EE3 360 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 FRRS1LQ9P0K9 344 aa12.81□□□□□ -0.36
COL20A1-206ENST00000479501 KLF13Q9Y2Y9 288 aaPredicted RBP12.81□□□□□ -0.36
COL20A1-206ENST00000479501 SIRT4Q9Y6E7 314 aaPredicted RBP12.81□□□□□ -0.36
COL20A1-206ENST00000479501 BCL2L11O43521 198 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 EPPINO95925 133 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 SCAND1P57086 179 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.8□□□□□ -0.36
COL20A1-206ENST00000479501 DPPA2Q7Z7J5 298 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 KCNJ15Q99712 375 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 ZPBPQ9BS86 351 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 NEUROG3Q9Y4Z2 214 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 NDUFB6O95139 128 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 SLC10A1Q14973 349 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 ARTNQ5T4W7 220 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 AADACL3Q5VUY0 350 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 C9orf40Q8IXQ3 194 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 OR2V1Q8NHB1 315 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 FSCN3Q9NQT6 498 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 NTMQ9P121 344 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 KCNE5Q9UJ90 142 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 ACTL6BO94805 426 aa12.8□□□□□ -0.36
COL20A1-206ENST00000479501 RPL12P30050 165 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms