RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 SPSB4Q96A44 273 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 DDOQ99489 341 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 TSSK6Q9BXA6 273 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 TOR3AQ9H497 397 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 SP140LQ9H930 580 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 IL20Q9NYY1 176 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 ZNRD1Q9P1U0 126 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 CD300AQ9UGN4 299 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 VPREB3Q9UKI3 123 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 LYVE1Q9Y5Y7 322 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 MEGF8Q7Z7M0 2845 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 hCG_38984A0A1B0GV85 526 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 A0A1W2PRD5 423 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 A0A1W2PRF3 423 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 A0A1W2PRM7 423 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 DHRS12A0PJE2 317 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 SOX14O95416 240 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 TSPAN15O95858 294 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 IFNGP01579 166 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 APOC1P02654 83 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 CLUP10909 449 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 ZNF3P17036 446 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 SPI1P17947 270 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 CFL1P23528 166 aaKnown RBP10.9□□□□□ -0.66
VCL-205ENST00000478896 BLVRAP53004 296 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 ELF3P78545 371 aaPredicted RBP10.9□□□□□ -0.66
VCL-205ENST00000478896 MXRA7P84157 204 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 PRB3Q04118 309 aaPredicted RBP10.9□□□□□ -0.66
VCL-205ENST00000478896 C2orf68Q2NKX9 166 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 METAP1DQ6UB28 335 aaPredicted RBP10.9□□□□□ -0.66
VCL-205ENST00000478896 Q6ZSV7 163 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 RASSF6Q6ZTQ3 369 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 FAM57BQ71RH2 274 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 C1QL4Q86Z23 238 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 AQP11Q8NBQ7 271 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 OR2T33Q8NG76 320 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 NPRL2Q8WTW4 380 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 C12orf43Q96C57 262 aaKnown RBP10.9□□□□□ -0.66
VCL-205ENST00000478896 SEH1LQ96EE3 360 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 CDRT15Q96T59 188 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 MICU1Q9BPX6 476 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 BRD7Q9NPI1 651 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 ARMC1Q9NVT9 282 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 ZNF446Q9NWS9 450 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 PRPF19Q9UMS4 504 aaKnown RBP10.9□□□□□ -0.66
VCL-205ENST00000478896 BAIAP2Q9UQB8 552 aa10.9□□□□□ -0.66
VCL-205ENST00000478896 TET2Q6N021 2002 aaPredicted RBP10.89□□□□□ -0.67
VCL-205ENST00000478896 ANKRD61A6NGH8 418 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 RIIAD1A6NNX1 92 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 ACOT8O14734 319 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 CDIPTO14735 213 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 NPFFO15130 113 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 GPR37O15354 613 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 GASTP01350 101 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 SLC25A1P53007 311 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 ZNF121P58317 390 aaPredicted RBP10.89□□□□□ -0.67
VCL-205ENST00000478896 IL5RAQ01344 420 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 KLRD1Q13241 179 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 SNCBQ16143 134 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 TEX30Q5JUR7 227 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 KCTD8Q6ZWB6 473 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 ERI1Q8IV48 349 aaKnown RBP10.89□□□□□ -0.67
VCL-205ENST00000478896 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 ZSCAN4Q8NAM6 433 aaPredicted RBP10.89□□□□□ -0.67
VCL-205ENST00000478896 CSNK2A3Q8NEV1 391 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 OR52H1Q8NGJ2 320 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 OR4Q3Q8NH05 313 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 FAM110DQ8TAY7 271 aaPredicted RBP10.89□□□□□ -0.67
VCL-205ENST00000478896 OTULINQ96BN8 352 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 PGAM5Q96HS1 289 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 INTS14Q96SY0 518 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 DCTN5Q9BTE1 182 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 RTL8AQ9BWD3 113 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 OR10A2Q9H208 303 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 MED4Q9NPJ6 270 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 SNTG1Q9NSN8 517 aa10.89□□□□□ -0.67
VCL-205ENST00000478896 CMYA5Q8N3K9 4069 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 A0A1W2PQ09 198 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 MEIOCA2RUB1 952 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 RNASEK-C17orf49H0YIS7 233 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 SELLP14151 372 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 TGFBR2P37173 567 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 GSK3AP49840 483 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 DLX1P56177 255 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 EGR3Q06889 387 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 PPP1R8Q12972 351 aaKnown RBP10.88□□□□□ -0.67
VCL-205ENST00000478896 STUMQ69YW2 141 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 C16orf89Q6UX73 402 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 CYP2R1Q6VVX0 501 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 DEFB107AQ8IZN7 70 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 LY6G5BQ8NDX9 201 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 OR5T2Q8NGG2 359 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 SGK3Q96BR1 496 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 DMRTB1Q96MA1 342 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 C16orf95Q9H693 158 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 PPP1R3EQ9H7J1 279 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 NDE1Q9NXR1 346 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 HAO2Q9NYQ3 351 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 SLC25A10Q9UBX3 287 aaPredicted RBP10.88□□□□□ -0.67
VCL-205ENST00000478896 ZNF391Q9UJN7 358 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms