RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 HSMCR30P0CW71 290 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 RAD52P43351 418 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 WNT4P56705 351 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 OR12D2P58182 307 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 PPP1CBP62140 327 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 MFGE8Q08431 387 aaPredicted RBP12.3□□□□□ -0.44
USP11-207ENST00000478596 MRPL28Q13084 256 aaKnown RBP12.3□□□□□ -0.44
USP11-207ENST00000478596 ADIPOQQ15848 244 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 ODF4Q2M2E3 257 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 ZNF773Q6PK81 442 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 RHOUQ7L0Q8 258 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 MRPL21Q7Z2W9 205 aaKnown RBP12.3□□□□□ -0.44
USP11-207ENST00000478596 KCTD20Q7Z5Y7 419 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 KLBQ86Z14 1044 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 OR5L1Q8NGL2 311 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 OR1J1Q8NGS3 322 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 OR52N1Q8NH53 320 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 UBASH3BQ8TF42 649 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 COG8Q96MW5 612 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 ZNF75AQ96N20 296 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 NR1H4Q96RI1 486 aaPredicted RBP12.3□□□□□ -0.44
USP11-207ENST00000478596 BCL2L14Q9BZR8 327 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 OR10A2Q9H208 303 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 DUSP21Q9H596 190 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 ISG20L2Q9H9L3 353 aaKnown RBP12.3□□□□□ -0.44
USP11-207ENST00000478596 ZMAT3Q9HA38 289 aaKnown RBP12.3□□□□□ -0.44
USP11-207ENST00000478596 PTTG3PQ9NZH4 202 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 PPIAL4AQ9Y536 164 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 R4GMQ9 66 aa12.3□□□□□ -0.44
USP11-207ENST00000478596 PNMA8CA0A1B0GUJ8 204 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 TMEM129A0AVI4 362 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 VSTM5A8MXK1 200 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 OR4A8P0C604 315 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 ATP6V1B1P15313 513 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 PRTN3P24158 256 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 WNT5AP41221 380 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 MAP2K4P45985 399 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 TAS2R43P59537 309 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 HGFACQ04756 655 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 TUSC1Q2TAM9 212 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 RGS7BPQ6MZT1 257 aaPredicted RBP12.29□□□□□ -0.44
USP11-207ENST00000478596 ZNF101Q8IZC7 436 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 TSPAN14Q8NG11 270 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 OR52H1Q8NGJ2 320 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 HAVCR2Q8TDQ0 301 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 GATAD2BQ8WXI9 593 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 PELI1Q96FA3 418 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 CDCA4Q9BXL8 241 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 COMMD4Q9H0A8 199 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 G6PC2Q9NQR9 355 aa12.29□□□□□ -0.44
USP11-207ENST00000478596 A0A087WXM4 84 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 A0A1W2PPW3 197 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 XRCC2O43543 280 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 MRPS14O60783 128 aaKnown RBP12.28□□□□□ -0.44
USP11-207ENST00000478596 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
USP11-207ENST00000478596 ADRA2AP08913 450 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 ZNF35P13682 527 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 PSMB9P28065 219 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 UCP2P55851 309 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 SELENOVP59797 346 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 TBCEQ15813 527 aaPredicted RBP12.28□□□□□ -0.44
USP11-207ENST00000478596 NEDD8Q15843 81 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 ZNF367Q7RTV3 350 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 ZNF676Q8N7Q3 588 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 NANPQ8TBE9 248 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 PBOV1Q9GZY1 135 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 OR52A1Q9UKL2 312 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 FZR1Q9UM11 496 aa12.28□□□□□ -0.44
USP11-207ENST00000478596 A0A1B0GVI7 797 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 J3QW42 95 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 NR4A1P22736 598 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 FPR2P25090 351 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 OTX1P32242 354 aaPredicted RBP12.27□□□□□ -0.45
USP11-207ENST00000478596 DCTDP32321 178 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 ERVS71-1P61550 626 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 SPHARQ15513 63 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 NANOGP1Q8N7R0 232 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 ZFP41Q8N8Y5 198 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 OR8B12Q8NGG6 310 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 OR2AE1Q8NHA4 323 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 FCGR1BQ92637 280 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 C1QTNF5Q9BXJ0 243 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 TMPRSS13Q9BYE2 586 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 PLEKHA1Q9HB21 404 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 TBCCD1Q9NVR7 557 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 FAM206AQ9NX38 181 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 CMAHPQ9Y471 501 aa12.27□□□□□ -0.45
USP11-207ENST00000478596 TRBV2A0A0J9YWF9 115 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 GGT3PA6NGU5 568 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 H3BSH0 61 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 TIMM8AO60220 97 aaPredicted RBP12.26□□□□□ -0.45
USP11-207ENST00000478596 NGFP01138 241 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 UBCP0CG48 685 aaKnown RBP12.26□□□□□ -0.45
USP11-207ENST00000478596 CFL1P23528 166 aaKnown RBP12.26□□□□□ -0.45
USP11-207ENST00000478596 MMP16P51512 607 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 KLF3P57682 345 aaPredicted RBP12.26□□□□□ -0.45
USP11-207ENST00000478596 SLC3A1Q07837 685 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 ZNF718Q3SXZ3 478 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms