RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 KLHL12Q53G59 568 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 SPATA46Q5T0L3 261 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 LINC01590Q5TEZ4 76 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 GPR107Q5VW38 600 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 NXNL2Q5VZ03 156 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 CYB5R2Q6BCY4 276 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 ACSM5Q6NUN0 579 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 PLBD1Q6P4A8 553 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 KCTD18Q6PI47 426 aaPredicted RBP6.77□□□□□ -1.33
DDX39B-218ENST00000478365 DEGS2Q6QHC5 323 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 CFAP77Q6ZQR2 320 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 PGAP1Q75T13 922 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 MRPL21Q7Z2W9 205 aaKnown RBP6.77□□□□□ -1.33
DDX39B-218ENST00000478365 LRP11Q86VZ4 500 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.77□□□□□ -1.33
DDX39B-218ENST00000478365 LINC00346Q8IVM7 164 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 HS3ST5Q8IZT8 346 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 FTMTQ8N4E7 242 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 TEX29Q8N6K0 151 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 IQCF1Q8N6M8 205 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 OR52H1Q8NGJ2 320 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 OR8J1Q8NGP2 316 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 OR13G1Q8NGZ3 307 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 RNF133Q8WVZ7 376 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 ASB17Q8WXJ9 295 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 LRTOMTQ8WZ04 291 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 RFKQ969G6 155 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 ERGIC1Q969X5 290 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 SLAMF6Q96DU3 332 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 KCNJ15Q99712 375 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 GABARAPL3Q9BY60 117 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 OR51V1Q9H2C8 321 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 WDR76Q9H967 626 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 PNRC2Q9NPJ4 139 aaKnown RBP6.77□□□□□ -1.33
DDX39B-218ENST00000478365 IFT46Q9NQC8 304 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 ACOXLQ9NUZ1 547 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 TMEM160Q9NX00 188 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 MYEF2Q9P2K5 600 aaKnown RBP6.77□□□□□ -1.33
DDX39B-218ENST00000478365 STARD10Q9Y365 291 aa6.77□□□□□ -1.33
DDX39B-218ENST00000478365 FN1P02751 2386 aaKnown RBP6.77□□□□□ -1.33
DDX39B-218ENST00000478365 A0A096LNT2 108 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.76□□□□□ -1.33
DDX39B-218ENST00000478365 TVP23AA6NH52 213 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 FAM183AA6NL82 134 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 LY6G6DO95868 133 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 GPANK1O95872 356 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 GYPBP06028 91 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 HNF1AP20823 631 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 DCTDP32321 178 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 SRP9P49458 86 aaKnown RBP6.76□□□□□ -1.33
DDX39B-218ENST00000478365 CCL8P80075 99 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 TNFAIP6P98066 277 aaPredicted RBP6.76□□□□□ -1.33
DDX39B-218ENST00000478365 PSG7Q13046 419 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 EIF2B1Q14232 305 aaKnown RBP6.76□□□□□ -1.33
DDX39B-218ENST00000478365 GGTLC2Q14390 218 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 C6orf52Q5T4I8 152 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 USP51Q70EK9 711 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 SLC16A9Q7RTY1 509 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 DPY19L4Q7Z388 723 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 CPOQ8IVL8 374 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 TIGD4Q8IY51 512 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 C1orf87Q8N0U7 546 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 ZNF283Q8N7M2 679 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 CELF2-AS1Q8N7Q2 184 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 DTX3Q8N9I9 347 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 ZNF511Q8NB15 262 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 OR8G5Q8NG78 346 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 OR51L1Q8NGJ5 315 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 OTOSQ8NHW6 89 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 TMEM163Q8TC26 289 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 ST7LQ8TDW4 575 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 SPRYD4Q8WW59 207 aaPredicted RBP6.76□□□□□ -1.33
DDX39B-218ENST00000478365 UFD1Q92890 307 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 RAB1CQ92928 201 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 PHF21AQ96BD5 680 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 RAB39BQ96DA2 213 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 CMBLQ96DG6 245 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 CNN2Q99439 309 aaKnown RBP6.76□□□□□ -1.33
DDX39B-218ENST00000478365 APOL4Q9BPW4 351 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 BPESC1Q9GZL8 116 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 OR10A2Q9H208 303 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 ABCB9Q9NP78 766 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 PCDHB16Q9NRJ7 776 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 CENPMQ9NSP4 180 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 HAO2Q9NYQ3 351 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 TVP23BQ9NYZ1 205 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 USE1Q9NZ43 259 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 LPAR3Q9UBY5 353 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 WARS2Q9UGM6 360 aaKnown RBP6.76□□□□□ -1.33
DDX39B-218ENST00000478365 IL19Q9UHD0 177 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 LAMP5Q9UJQ1 280 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 SPATA2Q9UM82 520 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 OAZ3Q9UMX2 235 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 SNX5Q9Y5X3 404 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 YLPM1P49750 1951 aaKnown RBP6.76□□□□□ -1.33
DDX39B-218ENST00000478365 MALRD1Q5VYJ5 2156 aa6.76□□□□□ -1.33
DDX39B-218ENST00000478365 VPS13CQ709C8 3753 aa6.75□□□□□ -1.33
DDX39B-218ENST00000478365 ZNF469Q96JG9 3925 aaPredicted RBP6.75□□□□□ -1.33
DDX39B-218ENST00000478365 TANC2Q9HCD6 1990 aa6.75□□□□□ -1.33
DDX39B-218ENST00000478365 A0A1B0GWJ7 208 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms