RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 OR3A4PP47883 348 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 FGL1Q08830 312 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 LY6G6FQ5SQ64 297 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 TMEM65Q6PI78 240 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 CHMP1BQ7LBR1 199 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 COMMD2Q86X83 199 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 OR5M8Q8NGP6 311 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 MRGPRFQ96AM1 343 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 FAM71F1Q96KD3 344 aaPredicted RBP10.71□□□□□ -0.69
PTPRF-212ENST00000477970 SOX7Q9BT81 388 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 TMEM59Q9BXS4 323 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 CST11Q9H112 138 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 IFT46Q9NQC8 304 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 MED9Q9NWA0 146 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 E9PLN8 166 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 TERTO14746 1132 aaKnown RBP10.71□□□□□ -0.69
PTPRF-212ENST00000477970 B3GALNT1O75752 331 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 TCN2P20062 427 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 ANOS1P23352 680 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 RPS27AP62979 156 aaKnown RBP10.71□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF101Q8IZC7 436 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 ARRDC1Q8N5I2 433 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 OR2V1Q8NHB1 315 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 RHBDD1Q8TEB9 315 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 ELMOD3Q96FG2 381 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 JSRP1Q96MG2 331 aaPredicted RBP10.71□□□□□ -0.69
PTPRF-212ENST00000477970 SLX1AQ9BQ83 275 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 GPR87Q9BY21 358 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 VSIG4Q9Y279 399 aa10.71□□□□□ -0.69
PTPRF-212ENST00000477970 SYNGR3O43761 229 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 TOXO94900 526 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 HCKP08631 526 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 SLC2A1P11166 492 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 SSTR2P30874 369 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 S100A11P31949 105 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 CARD18P57730 90 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 TAS2R31P59538 309 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 DHRS2Q13268 280 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 NHLRC3Q5JS37 347 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 LYG2Q86SG7 212 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 CHST4Q8NCG5 386 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 STEAP2Q8NFT2 490 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 RAB3CQ96E17 227 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 OR10A2Q9H208 303 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 WASF3Q9UPY6 502 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 KCNK7Q9Y2U2 307 aa10.71□□□□□ -0.7
PTPRF-212ENST00000477970 RIF1Q5UIP0 2472 aaKnown RBP10.7□□□□□ -0.7
PTPRF-212ENST00000477970 IGHV3-15A0A0B4J1V0 119 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 C21orf140B9A014 251 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 M0R135 149 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 GNB3P16520 340 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 OTX2P32243 289 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 GFRA1P56159 465 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 PLAC9Q5JTB6 97 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 RAB11FIP2Q7L804 512 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 DEFB124Q8NES8 71 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 OR14L1PQ8NHC6 308 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 PSMF1Q92530 271 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 HAS2Q92819 552 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 CMBLQ96DG6 245 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 FBXO17Q96EF6 278 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 ZNF799Q96GE5 643 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 SELENOIQ9C0D9 397 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 ZMAT3Q9HA38 289 aaKnown RBP10.7□□□□□ -0.7
PTPRF-212ENST00000477970 TMEM38BQ9NVV0 291 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 MYEF2Q9P2K5 600 aaKnown RBP10.7□□□□□ -0.7
PTPRF-212ENST00000477970 A0A0G2JMM0 328 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 A0A1W2PPB8 328 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 A0A1W2PRS3 328 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 OR5H15A6NDH6 313 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 OR6C6A6NF89 314 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 KIR3DP1A8MWS1 328 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 CYTIPO60759 359 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 SLC25A4P12235 298 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 PPP3CBP16298 524 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 AGTR1P30556 359 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 PTGFRP43088 359 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 CYB561P49447 251 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 NOVA1P51513 510 aaKnown RBP10.7□□□□□ -0.7
PTPRF-212ENST00000477970 SCRN3Q0VDG4 424 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 KISS1Q15726 138 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 DCAF12L2Q5VW00 463 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 HOGA1Q86XE5 327 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 ZNF100Q8IYN0 542 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 OR8H3Q8N146 312 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 ESX1Q8N693 406 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 MITD1Q8WV92 249 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 NKD1Q969G9 470 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 CPNE4Q96A23 557 aaPredicted RBP10.7□□□□□ -0.7
PTPRF-212ENST00000477970 CPNE2Q96FN4 548 aaPredicted RBP10.7□□□□□ -0.7
PTPRF-212ENST00000477970 NICN1Q9BSH3 213 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 RBM24Q9BX46 236 aaKnown RBP10.7□□□□□ -0.7
PTPRF-212ENST00000477970 GSX2Q9BZM3 304 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 P4HTMQ9NXG6 502 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 NCKAP5O14513 1909 aa10.7□□□□□ -0.7
PTPRF-212ENST00000477970 CD96P40200 585 aa10.69□□□□□ -0.7
PTPRF-212ENST00000477970 CXADRP78310 365 aa10.69□□□□□ -0.7
PTPRF-212ENST00000477970 TRIP6Q15654 476 aaKnown RBP10.69□□□□□ -0.7
PTPRF-212ENST00000477970 C3P1Q6ZMU1 363 aa10.69□□□□□ -0.7
PTPRF-212ENST00000477970 TMEM104Q8NE00 496 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms