RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ZNF584Q8IVC4 421 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 AQP12AQ8IXF9 295 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 MMGT1Q8N4V1 131 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 SMYD1Q8NB12 490 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 ATP6V1C2Q8NEY4 427 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 OR7G2Q8NG99 324 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 C16orf58Q96GQ5 468 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 CCDC42Q96M95 316 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 ZNF681Q96N22 645 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 OR5B2Q96R09 309 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 SERPINI1Q99574 410 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 FAIM2Q9BWQ8 316 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 NAT10Q9H0A0 1025 aaKnown RBP3.44□□□□□ -1.86
VPS50-214ENST00000477935 HSD3B7Q9H2F3 369 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 NOX3Q9HBY0 568 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 UBQLN4Q9NRR5 601 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 SLCO1C1Q9NYB5 712 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 GPR132Q9UNW8 380 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 SOX21Q9Y651 276 aaPredicted RBP3.44□□□□□ -1.86
VPS50-214ENST00000477935 HUWE1Q7Z6Z7 4374 aaKnown RBP3.44□□□□□ -1.86
VPS50-214ENST00000477935 TRAV40A0A0B4J280 105 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 KIR2DS1A0A191URI9 304 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 A0A1W2PQD3 144 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 ISPDA4D126 451 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 BTBD17A6NE02 478 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 RPL37AP8A6NKH3 93 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 SRRM4A7MD48 611 aaKnown RBP3.43□□□□□ -1.86
VPS50-214ENST00000477935 H3BNH8 94 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 TXNL1O43396 289 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 RAD51CO43502 376 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 EIF1BO60739 113 aaKnown RBP3.43□□□□□ -1.86
VPS50-214ENST00000477935 NUDT14O95848 222 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 RENP00797 406 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 LHBP01229 141 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 KLK1P06870 262 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 KRTAP1-4P0C5Y4 121 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 DNAH10OSP0CZ25 163 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 MLNP12872 115 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 AZU1P20160 251 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 MAGEB1P43366 347 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 ASMTP46597 345 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 P2RX1P51575 399 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 TRA2BP62995 288 aaKnown RBP3.43□□□□□ -1.86
VPS50-214ENST00000477935 CCL8P80075 99 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 FOXF1Q12946 379 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 C18orf21Q32NC0 220 aaPredicted RBP3.43□□□□□ -1.86
VPS50-214ENST00000477935 TRMT5Q32P41 509 aaKnown RBP3.43□□□□□ -1.86
VPS50-214ENST00000477935 VPS26BQ4G0F5 336 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 TMEM155Q4W5P6 130 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 TSPO2Q5TGU0 170 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 LEMD1Q68G75 181 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 FAM45BPQ6NSW5 357 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 C3orf33Q6P1S2 294 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 SASS6Q6UVJ0 657 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 CASP12Q6UXS9 341 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 BRD3OSQ6XYD6 125 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 SIGLEC15Q6ZMC9 328 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 RAPH1Q70E73 1250 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 TMUB2Q71RG4 321 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 COMTD1Q86VU5 262 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 OR1K1Q8NGR3 316 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 FAM45AQ8TCE6 357 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 CCL17Q92583 94 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 BCL2L2Q92843 193 aaPredicted RBP3.43□□□□□ -1.86
VPS50-214ENST00000477935 TMEM45BQ96B21 275 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 LRRC39Q96DD0 335 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 NAP1L5Q96NT1 182 aaPredicted RBP3.43□□□□□ -1.86
VPS50-214ENST00000477935 AMDHD1Q96NU7 426 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 ALKBH3Q96Q83 286 aaPredicted RBP3.43□□□□□ -1.86
VPS50-214ENST00000477935 ATG101Q9BSB4 218 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 ACPTQ9BZG2 426 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 SRD5A3Q9H8P0 318 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 NANOGQ9H9S0 305 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 PATZ1Q9HBE1 687 aaKnown RBP3.43□□□□□ -1.86
VPS50-214ENST00000477935 CRLF2Q9HC73 371 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 ACOXLQ9NUZ1 547 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 ZNF581Q9P0T4 197 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 SENP1Q9P0U3 644 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 TRAPPC4Q9Y296 219 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 TMED7Q9Y3B3 224 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 HERC1Q15751 4861 aa3.43□□□□□ -1.86
VPS50-214ENST00000477935 ARHGAP32A7KAX9 2087 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NCF1BA6NI72 391 aaPredicted RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 A8MU10 97 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NCF1CA8MVU1 366 aaPredicted RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 K7EPI3 171 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 RAMP3O60896 148 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 OXSR1O95747 527 aaPredicted RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 ZNF35P13682 527 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NCF1P14598 390 aaPredicted RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 TSPAN8P19075 237 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 GABRA3P34903 492 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NPBWR1P48145 328 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 EFNB2P52799 333 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 BASP1P80723 227 aaKnown RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 H3F3AP84243 136 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 GALK2Q01415 458 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 PAX2Q02962 417 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 PDE7AQ13946 482 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms