RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 KCTD7Q96MP8 289 aa8.4□□□□□ -1.06
NIFK-205ENST00000477693 BCL2L14Q9BZR8 327 aa8.4□□□□□ -1.06
NIFK-205ENST00000477693 TBCCD1Q9NVR7 557 aa8.4□□□□□ -1.06
NIFK-205ENST00000477693 EIF3KQ9UBQ5 218 aaKnown RBP8.4□□□□□ -1.06
NIFK-205ENST00000477693 HHLA2Q9UM44 414 aa8.4□□□□□ -1.06
NIFK-205ENST00000477693 ZNF469Q96JG9 3925 aaPredicted RBP8.4□□□□□ -1.07
NIFK-205ENST00000477693 TRAV1-2A0A0B4J238 106 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 C5orf49A4QMS7 147 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 PRR32B1ATL7 298 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 F5H5K5 113 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 PSMD9O00233 223 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 XRCC2O43543 280 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 SC5DO75845 299 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 ACSM4P0C7M7 580 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 PSKH1P11801 424 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 ZNF250P15622 560 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 CCL1P22362 96 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 GADD45AP24522 165 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 GTF2A1P52655 376 aaPredicted RBP8.39□□□□□ -1.07
NIFK-205ENST00000477693 EFNA4P52798 201 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 UCP2P55851 309 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 ZNF121P58317 390 aaPredicted RBP8.39□□□□□ -1.07
NIFK-205ENST00000477693 SLC3A1Q07837 685 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 CTF1Q16619 201 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 CLEC12BQ2HXU8 276 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 Q499Y3 187 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 ACSM3Q53FZ2 586 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 ZBTB37Q5TC79 503 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 RGS7BPQ6MZT1 257 aaPredicted RBP8.39□□□□□ -1.07
NIFK-205ENST00000477693 UNQ9370/PRO34162Q6UXP9 181 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 LINC00299Q6ZSB3 139 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 Q6ZSR3 168 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 USP43Q70EL4 1123 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 DOK3Q7L591 496 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 PRSS45Q7RTY3 260 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 APOBEC3DQ96AK3 386 aaPredicted RBP8.39□□□□□ -1.07
NIFK-205ENST00000477693 SORCS2Q96PQ0 1159 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 C1QTNF5Q9BXJ0 243 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 MRPL37Q9BZE1 423 aaKnown RBP8.39□□□□□ -1.07
NIFK-205ENST00000477693 PBOV1Q9GZY1 135 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 SLITRK2Q9H156 845 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 NEK6Q9HC98 313 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 G6PC2Q9NQR9 355 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 SLC22A13Q9Y226 551 aa8.39□□□□□ -1.07
NIFK-205ENST00000477693 HEATR1Q9H583 2144 aaKnown RBP8.39□□□□□ -1.07
NIFK-205ENST00000477693 IGLV3-9A0A075B6K5 115 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 TRBV5-5A0A0J9YX44 114 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 A0A1B0GVI7 797 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 MEGF11A6BM72 1044 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 MAGEB4O15481 346 aaPredicted RBP8.38□□□□□ -1.07
NIFK-205ENST00000477693 ALX3O95076 343 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 PNPP00491 289 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 IL1AP01583 271 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 ANXA2P07355 339 aaKnown RBP8.38□□□□□ -1.07
NIFK-205ENST00000477693 FAM157BP0CG42 384 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 CCNOP22674 350 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 DDOSTP39656 456 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 PSMB10P40306 273 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 WNT5AP41221 380 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 SLC6A9P48067 706 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 MTNR1BP49286 362 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 PRKXP51817 358 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 NANOS3P60323 173 aaKnown RBP8.38□□□□□ -1.07
NIFK-205ENST00000477693 ERVS71-1P61550 626 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 MALLQ13021 153 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 RSPO1Q2MKA7 263 aaPredicted RBP8.38□□□□□ -1.07
NIFK-205ENST00000477693 ZMAT1Q5H9K5 638 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 WDR38Q5JTN6 314 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 OTPQ5XKR4 325 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 SLC16A12Q6ZSM3 486 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 SPATC1Q76KD6 591 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 CEACAM19Q7Z692 300 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 LRP11Q86VZ4 500 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 ZNF101Q8IZC7 436 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 PRSS35Q8N3Z0 413 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 FTMTQ8N4E7 242 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 PLPP7Q8NBV4 271 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 SPSB4Q96A44 273 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 PGAM5Q96HS1 289 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 C18orf12Q96KH6 178 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 COX4I2Q96KJ9 171 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 CHCHD6Q9BRQ6 235 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 TMED9Q9BVK6 235 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 CKLFQ9UBR5 152 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 SIRT4Q9Y6E7 314 aaPredicted RBP8.38□□□□□ -1.07
NIFK-205ENST00000477693 A3GALT2U3KPV4 340 aa8.38□□□□□ -1.07
NIFK-205ENST00000477693 PLCE1Q9P212 2302 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 LOC100506127A0A0U1RQW1 187 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 H3BMQ9 156 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 M0R233 179 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 GABRPO00591 440 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 PDCD5O14737 125 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 SYT7O43581 403 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 SSX4O60224 188 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 GPX5O75715 221 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 IGLV3-1P01715 115 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 TTRP02766 147 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 LCATP04180 440 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 CSF3P09919 207 aa8.37□□□□□ -1.07
NIFK-205ENST00000477693 UCHL1P09936 223 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms