RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CST4P01036 141 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 CFHR2P36980 270 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 KLF17Q5JT82 389 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-211ENST00000477612 TEX36Q5VZQ5 186 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 ZNF826PQ6ZT77 177 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 ZNF679Q8IYX0 411 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 GALNT4Q8N4A0 578 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 TCEANCQ8N8B7 351 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 C19orf18Q8NEA5 215 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 OR1M1Q8NGA1 313 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 OR8B12Q8NGG6 310 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 ASB17Q8WXJ9 295 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 ITPKCQ96DU7 683 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 OR8B4Q96RC9 309 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 MNTQ99583 582 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 SUCNR1Q9BXA5 334 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 OSBPL10Q9BXB5 764 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 MROQ9BYG7 248 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 TLNRD1Q9H1K6 362 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 FAM206AQ9NX38 181 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 CLN8Q9UBY8 286 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 COPS3Q9UNS2 423 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 A0A0U1RQV5 110 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 KIR2DS1A0A191URI9 304 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 OOEPA6NGQ2 149 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 SLC22A31A6NKX4 558 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 CIB2O75838 187 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 IGLV3-1P01715 115 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 ACKR3P25106 362 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 HOXA4Q00056 320 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-211ENST00000477612 FAM76BQ5HYJ3 339 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 BTNL3Q6UXE8 466 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 JMJD8Q96S16 334 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 CIB1Q99828 191 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 PPP1R3EQ9H7J1 279 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 ABCB9Q9NP78 766 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 H2AFY2Q9P0M6 372 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-211ENST00000477612 NUP50Q9UKX7 468 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 ANK2Q01484 3957 aa18.12■□□□□ 0.49
COL9A3-211ENST00000477612 A6NLC8 198 aa18.11■□□□□ 0.49
COL9A3-211ENST00000477612 PRR32B1ATL7 298 aa18.11■□□□□ 0.49
COL9A3-211ENST00000477612 MRPL3P09001 348 aaKnown RBP18.11■□□□□ 0.49
COL9A3-211ENST00000477612 FPR2P25090 351 aa18.11■□□□□ 0.49
COL9A3-211ENST00000477612 IL5RAQ01344 420 aa18.11■□□□□ 0.49
COL9A3-211ENST00000477612 GFOD2Q3B7J2 385 aa18.11■□□□□ 0.49
COL9A3-211ENST00000477612 SFRP4Q6FHJ7 346 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-211ENST00000477612 BCDIN3DQ7Z5W3 292 aaKnown RBP18.11■□□□□ 0.49
COL9A3-211ENST00000477612 CNN2Q99439 309 aaKnown RBP18.11■□□□□ 0.49
COL9A3-211ENST00000477612 PAPOLGQ9BWT3 736 aaKnown RBP18.11■□□□□ 0.49
COL9A3-211ENST00000477612 GABARAPL3Q9BY60 117 aa18.11■□□□□ 0.49
COL9A3-211ENST00000477612 SEMA6AQ9H2E6 1030 aa18.11■□□□□ 0.49
COL9A3-211ENST00000477612 KAAG1Q9UBP8 84 aa18.11■□□□□ 0.49
COL9A3-211ENST00000477612 CTSZQ9UBR2 303 aa18.11■□□□□ 0.49
COL9A3-211ENST00000477612 TMEM269A0A1B0GVZ9 245 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 ATP6V1B1P15313 513 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 GNALP38405 381 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 ACTR3P61158 418 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 C11orf91Q3C1V1 193 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 ARMCX4Q5H9R4 360 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 WDR82Q6UXN9 313 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 GID4Q8IVV7 300 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 UPRTQ96BW1 309 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 SLC6A7Q99884 636 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 MICU1Q9BPX6 476 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 ADGRL4Q9HBW9 690 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 ERVK-18Q9QC07 812 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 OAZ3Q9UMX2 235 aa18.1■□□□□ 0.49
COL9A3-211ENST00000477612 TMEM210A6NLX4 147 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 ANXA2P2A6NMY6 339 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 C3orf80F5H4A9 247 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 M0R129 80 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 PSMD9O00233 223 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 SRSF10O75494 262 aaKnown RBP18.09■□□□□ 0.49
COL9A3-211ENST00000477612 MUC1P15941 1255 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-211ENST00000477612 EGR1P18146 543 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 POLR2IP36954 125 aaKnown RBP18.09■□□□□ 0.49
COL9A3-211ENST00000477612 PRDX4Q13162 271 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 FAM90A1Q86YD7 464 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 BPIFB2Q8N4F0 458 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 FAM216AQ8WUB2 273 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 OR5P3Q8WZ94 311 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 IL4I1Q96RQ9 567 aa18.09■□□□□ 0.49
COL9A3-211ENST00000477612 NUDT16L1Q9BRJ7 211 aaKnown RBP18.09■□□□□ 0.49
COL9A3-211ENST00000477612 hCG_1807616A0A1W2PRN6 198 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 ZNF850A8MQ14 1090 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 MAP2K3P46734 347 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 RIDAP52758 137 aaKnown RBP18.08■□□□□ 0.48
COL9A3-211ENST00000477612 CD276Q5ZPR3 534 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 SLC35F2Q8IXU6 374 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-211ENST00000477612 BOLLQ8N9W6 283 aaKnown RBP18.08■□□□□ 0.48
COL9A3-211ENST00000477612 OR10Z1Q8NGY1 313 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 LRRC29Q8WV35 223 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 RBM4BQ9BQ04 359 aaKnown RBP18.08■□□□□ 0.48
COL9A3-211ENST00000477612 RTL8AQ9BWD3 113 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 PBOV1Q9GZY1 135 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 CLN6Q9NWW5 311 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 ZNF69Q9UC07 566 aa18.08■□□□□ 0.48
COL9A3-211ENST00000477612 NUFIP1Q9UHK0 495 aaKnown RBP18.08■□□□□ 0.48
COL9A3-211ENST00000477612 SRRM5B3KS81 715 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms