RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 OR1M1Q8NGA1 313 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 SGMS2Q8NHU3 365 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 LRRC29Q8WV35 223 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 NRBF2Q96F24 287 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 ZNF48Q96MX3 618 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-204ENST00000477531 AMELYQ99218 206 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 PCGF1Q9BSM1 259 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 ZNF391Q9UJN7 358 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 LAMP5Q9UJQ1 280 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 RHBDD3Q9Y3P4 386 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 MPC1Q9Y5U8 109 aa13.07□□□□□ -0.32
CLDN11-204ENST00000477531 TENM1Q9UKZ4 2725 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 TCRBV3S1A0A5B6 114 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 ZNF879B4DU55 563 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 C22orf46C9J442 243 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 CLDN34H7C241 214 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 P2RY10O00398 339 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 TMPRSS2O15393 492 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 TOX4O94842 621 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 LHBP01229 141 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 RNASE1P07998 156 aaKnown RBP13.06□□□□□ -0.32
CLDN11-204ENST00000477531 MUC1P15941 1255 aaPredicted RBP13.06□□□□□ -0.32
CLDN11-204ENST00000477531 HOXA4Q00056 320 aaPredicted RBP13.06□□□□□ -0.32
CLDN11-204ENST00000477531 C11orf91Q3C1V1 193 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 METTL11BQ5VVY1 283 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 TEX36Q5VZQ5 186 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 FAM90A1Q86YD7 464 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 HIST1H2AAQ96QV6 131 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 RTL8AQ9BWD3 113 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 SLC25A19Q9HC21 320 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 PAPOLBQ9NRJ5 636 aaKnown RBP13.06□□□□□ -0.32
CLDN11-204ENST00000477531 TVP23BQ9NYZ1 205 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 CTSZQ9UBR2 303 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 POMPQ9Y244 141 aa13.06□□□□□ -0.32
CLDN11-204ENST00000477531 IGHV3OR15-7A0A075B7D8 119 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 TMEM210A6NLX4 147 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 DVL1O14640 695 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 CFHR2P36980 270 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 PSMA6P60900 246 aaKnown RBP13.05□□□□□ -0.32
CLDN11-204ENST00000477531 POU4F2Q12837 409 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 APOFQ13790 326 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 SLC9A3R2Q15599 337 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 LCN1P1Q5VSP4 162 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 TMEM236Q5W0B7 351 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 KCTD18Q6PI47 426 aaPredicted RBP13.05□□□□□ -0.32
CLDN11-204ENST00000477531 BRD3OSQ6XYD6 125 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 KCTD8Q6ZWB6 473 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 SLC36A1Q7Z2H8 476 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 GALNT4Q8N4A0 578 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 PAPD5Q8NDF8 572 aaKnown RBP13.05□□□□□ -0.32
CLDN11-204ENST00000477531 FAM81AQ8TBF8 368 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 ST8SIA4Q92187 359 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 PRRG3Q9BZD7 231 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 RASSF4Q9H2L5 321 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 ZNF319Q9P2F9 582 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 KAAG1Q9UBP8 84 aa13.05□□□□□ -0.32
CLDN11-204ENST00000477531 CDIPTO14735 213 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 TNFRSF13BO14836 293 aaPredicted RBP13.04□□□□□ -0.32
CLDN11-204ENST00000477531 EGR1P18146 543 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 ALOX5APP20292 161 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 CRISP1P54107 249 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 CSNK2BP67870 215 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 IL13RA1P78552 427 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 PRDX4Q13162 271 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 PDCD1Q15116 288 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 DEGS2Q6QHC5 323 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 WDR82Q6UXN9 313 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 BBS1Q8NFJ9 593 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 GATAD2BQ8WXI9 593 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 PIGCQ92535 297 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 SLC7A6OSQ96CW6 309 aaPredicted RBP13.04□□□□□ -0.32
CLDN11-204ENST00000477531 WDFY2Q96P53 400 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 MROQ9BYG7 248 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 YIPF3Q9GZM5 350 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 NOX4Q9NPH5 578 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 TMEM14AQ9Y6G1 99 aa13.04□□□□□ -0.32
CLDN11-204ENST00000477531 ACOD1A6NK06 481 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 ZNF850A8MQ14 1090 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 NDUFB3O43676 98 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 CST4P01036 141 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 MAP2K3P46734 347 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 RASSF2P50749 326 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 ARF6P62330 175 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 DEFB112Q30KQ8 113 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 C16orf87Q6PH81 154 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 WDR86Q86TI4 376 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 COMMD2Q86X83 199 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 C11orf53Q8IXP5 236 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 ZDHHC23Q8IYP9 409 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 OR8B12Q8NGG6 310 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 OR10Z1Q8NGY1 313 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 ITFG2Q969R8 447 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 C12orf43Q96C57 262 aaKnown RBP13.03□□□□□ -0.32
CLDN11-204ENST00000477531 ITPKCQ96DU7 683 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 RNF170Q96K19 258 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 FAM71F1Q96KD3 344 aaPredicted RBP13.03□□□□□ -0.32
CLDN11-204ENST00000477531 C1orf147Q96MC9 270 aaPredicted RBP13.03□□□□□ -0.32
CLDN11-204ENST00000477531 TEAD3Q99594 435 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 CCL13Q99616 98 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms