RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 THYN1Q9P016 225 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 MED11Q9P086 117 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 TMCC3Q9ULS5 477 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 TP53TG5Q9Y2B4 290 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 ENPP4Q9Y6X5 453 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 MPDZO75970 2070 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 IGLV3-32A0A0A0MS00 114 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 A0A0C4DFX4 3053 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 TRAPPC13A5PLN9 417 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 GJE1A6NN92 205 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 FAM166BA8MTA8 275 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 TNFRSF11BO00300 401 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 FAAHO00519 579 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 CLOCKO15516 846 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 SYT7O43581 403 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 TPST2O60704 377 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 FMO6PO60774 539 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 TRIM3O75382 744 aaPredicted RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 DIRAS1O95057 198 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 OR5F1O95221 314 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 GADD45GO95257 159 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 MT-ND1P03886 318 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 THRBP10828 461 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 PNMTP11086 282 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ZNF24P17028 368 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 CCNA2P20248 432 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 RRM2P31350 389 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 IFNGR2P38484 337 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 RFC3P40938 356 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 PTGDSP41222 190 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 EIF1P41567 113 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 ACAA2P42765 397 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 YAP1P46937 504 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 POLR2HP52434 150 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 ZNF136P52737 540 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 RIDAP52758 137 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 PPIAP62937 165 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 ELF3P78545 371 aaPredicted RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 VLDLRP98155 873 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 HOXC5Q00444 222 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ST3GAL3Q11203 375 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 MERTKQ12866 999 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 GK3PQ14409 553 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 GANABQ14697 944 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 SLC10A1Q14973 349 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 TRAM2Q15035 370 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 QPRTQ15274 297 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 RCN1Q15293 331 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 OR1Q1Q15612 314 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 INAQ16352 499 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ACKR1Q16570 336 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 TIGD3Q6B0B8 471 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ULK3Q6PHR2 472 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 TTC33Q6PID6 262 aaPredicted RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 CBLN3Q6UW01 205 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 APOOLQ6UXV4 268 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 SIGLEC15Q6ZMC9 328 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ZNF730Q6ZMV8 503 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 Q6ZS92 163 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 PIWIL3Q7Z3Z3 882 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 GRINAQ7Z429 371 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 RBM45Q8IUH3 476 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 OFCC1Q8IZS5 231 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 C10orf53Q8N6V4 93 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 FAM86B1Q8N7N1 296 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ICA1LQ8NDH6 482 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 FAM71CQ8NEG0 241 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ATP6V1C2Q8NEY4 427 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 OR2M3Q8NG83 312 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 OR6T1Q8NGN1 323 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 GPR119Q8TDV5 335 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ADAMTS16Q8TE57 1224 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 PHF10Q8WUB8 498 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 RNF138Q8WVD3 245 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 DNAJA4Q8WW22 397 aaPredicted RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 SLC38A4Q969I6 547 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 PNPLA2Q96AD5 504 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 NABP1Q96AH0 204 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 DDIT4LQ96D03 193 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 DUS3LQ96G46 650 aaKnown RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 SLC41A3Q96GZ6 507 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 C1orf147Q96MC9 270 aaPredicted RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 TAAR6Q96RI8 345 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 HES7Q9BYE0 225 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 TTTY12Q9BZ98 90 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 DCLRE1BQ9H816 532 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 SH2D2AQ9NP31 389 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 PNPLA3Q9NST1 481 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 DEPPQ9NTK1 212 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ACER3Q9NUN7 267 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 MED17Q9NVC6 651 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ARMC1Q9NVT9 282 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 QPCTLQ9NXS2 382 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 ZNF319Q9P2F9 582 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 RIMS3Q9UJD0 308 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 SPATA2Q9UM82 520 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 VSIG4Q9Y279 399 aa3.06□□□□□ -1.92
UBR3-209ENST00000477461 RPH3AQ9Y2J0 694 aaPredicted RBP3.06□□□□□ -1.92
UBR3-209ENST00000477461 C15orf41Q9Y2V0 281 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms