RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PRDX4Q13162 271 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 CDK5R1Q15078 307 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 TESK1Q15569 626 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 CARTPTQ16568 116 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 PRAMEF6Q5VXH4 476 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 RNLSQ5VYX0 342 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 DNM1P46Q6ZS02 220 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 Q6ZSR3 168 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 PRSS48Q7RTY5 328 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 WDR86Q86TI4 376 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 LRRC75A-AS1Q8N1F1 130 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 RPS4Y2Q8TD47 263 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 OR2V2Q96R30 315 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 CXXC4Q9H2H0 198 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 CYSLTR2Q9NS75 346 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 ZDHHC8Q9ULC8 765 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 ERGIC3Q9Y282 383 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 ZNF469Q96JG9 3925 aaPredicted RBP13.45□□□□□ -0.26
COPS3-207ENST00000477299 A0A1B0GVI7 797 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 MYL12BO14950 172 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 SYT7O43581 403 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 DHRS3O75911 302 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 CD55P08174 381 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 CFL1P23528 166 aaKnown RBP13.44□□□□□ -0.26
COPS3-207ENST00000477299 LIPAP38571 399 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 DDOSTP39656 456 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 SLC3A1Q07837 685 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 OR8G1Q15617 311 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 MPPED2Q15777 294 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 CEP78Q5JTW2 689 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 DMKNQ6E0U4 476 aaPredicted RBP13.44□□□□□ -0.26
COPS3-207ENST00000477299 RPL22L1Q6P5R6 122 aaKnown RBP13.44□□□□□ -0.26
COPS3-207ENST00000477299 DOK3Q7L591 496 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 ZNF676Q8N7Q3 588 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 SEMA6DQ8NFY4 1073 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 ZNF420Q8TAQ5 688 aaPredicted RBP13.44□□□□□ -0.26
COPS3-207ENST00000477299 UBASH3BQ8TF42 649 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 NEU4Q8WWR8 484 aaPredicted RBP13.44□□□□□ -0.26
COPS3-207ENST00000477299 ORAI1Q96D31 301 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 ADAT3Q96EY9 351 aaPredicted RBP13.44□□□□□ -0.26
COPS3-207ENST00000477299 MEGF10Q96KG7 1140 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 PAPOLGQ9BWT3 736 aaKnown RBP13.44□□□□□ -0.26
COPS3-207ENST00000477299 OPA3Q9H6K4 179 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 GPR173Q9NS66 373 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 DECR2Q9NUI1 292 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 NKIRAS2Q9NYR9 191 aa13.44□□□□□ -0.26
COPS3-207ENST00000477299 MRPL15Q9P015 296 aaKnown RBP13.44□□□□□ -0.26
COPS3-207ENST00000477299 IGHV4-30-2A0A087WSY4 118 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 ANKRD61A6NGH8 418 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 ANKRD30BLA7E2S9 258 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 THBS2P35442 1172 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 RIPPLY1Q0D2K3 151 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 MED22Q15528 200 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 CLEC12BQ2HXU8 276 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 MOB3CQ70IA8 216 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 RNF144BQ7Z419 303 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 EGFL6Q8IUX8 553 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 CSNK2A3Q8NEV1 391 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 OR5AK2Q8NH90 309 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 HPSE2Q8WWQ2 592 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 FGGYQ96C11 551 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 ITPKCQ96DU7 683 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 Q96MF0 132 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 ADAT1Q9BUB4 502 aaKnown RBP13.43□□□□□ -0.26
COPS3-207ENST00000477299 UFSP2Q9NUQ7 469 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 CGGBP1Q9UFW8 167 aaPredicted RBP13.43□□□□□ -0.26
COPS3-207ENST00000477299 ZNF391Q9UJN7 358 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 CREBBPQ92793 2442 aa13.43□□□□□ -0.26
COPS3-207ENST00000477299 ITPR3Q14573 2671 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 ZNF816-ZNF321PA0A0X1KG74 233 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 LOC390937A0A1W2PQ73 354 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 TRIM64A6NGJ6 449 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 TRIM64BA6NI03 449 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 RP2O75695 350 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 CST4P01036 141 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 ISG15P05161 165 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 UBCP0CG48 685 aaKnown RBP13.42□□□□□ -0.26
COPS3-207ENST00000477299 CELP19835 753 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 ACHEP22303 614 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 CRYBB2P43320 205 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 RPS11P62280 158 aaKnown RBP eCLIP13.42□□□□□ -0.26
COPS3-207ENST00000477299 EMX1Q04741 257 aaPredicted RBP13.42□□□□□ -0.26
COPS3-207ENST00000477299 SPHARQ15513 63 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 UBE2V2Q15819 145 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 PCGF3Q3KNV8 242 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 FAM209AQ5JX71 171 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 TMEM244Q5VVB8 128 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 ZNF826PQ6ZT77 177 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 KRT74Q7RTS7 529 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 C11orf53Q8IXP5 236 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 SPARTQ8N0X7 666 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 GHSRQ92847 366 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 PGLYRP3Q96LB9 341 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 MND1Q9BWT6 205 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 YTHDF1Q9BYJ9 559 aaKnown RBP13.42□□□□□ -0.26
COPS3-207ENST00000477299 SAP30LQ9HAJ7 183 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 GCM1Q9NP62 436 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 IL19Q9UHD0 177 aa13.42□□□□□ -0.26
COPS3-207ENST00000477299 FBXO9Q9UK97 447 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms