RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ADAT1Q9BUB4 502 aaKnown RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 IFT27Q9BW83 186 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 ACOXLQ9NUZ1 547 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 DCAF16Q9NXF7 216 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 MRPL15Q9P015 296 aaKnown RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 IGHV3OR16-10A0A075B7F0 116 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 A0A1B0GWJ7 208 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 OOEPA6NGQ2 149 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 A6NLC8 198 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 ANKRD30BLA7E2S9 258 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 M0R135 149 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 FFAR1O14842 300 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 PAX4O43316 350 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 ADAM20O43506 726 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 XRCC2O43543 280 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 FAM20BO75063 409 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 TIPRLO75663 272 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 GADD45GO95257 159 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 ACSM4P0C7M7 580 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 COX4I1P13073 169 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 CFHR2P36980 270 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 SLC15A1P46059 708 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 FHL1Q13642 323 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 GK2Q14410 553 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-214ENST00000477152 FAM209BQ5JX69 171 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 SLC36A1Q7Z2H8 476 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 C1QL4Q86Z23 238 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 KIR3DL3Q8N743 410 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 FAM86B1Q8N7N1 296 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 OR2T4Q8NH00 348 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 OR8S1Q8NH09 359 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 GNPDA2Q8TDQ7 276 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF799Q96GE5 643 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 C1orf147Q96MC9 270 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-214ENST00000477152 WDFY2Q96P53 400 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 ABCB9Q9NP78 766 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 FGFR1OP2Q9NVK5 253 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 CMTM6Q9NX76 183 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 LHFPL6Q9Y693 200 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 IGHV1-69DA0A0B4J2H0 117 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 A0A1B0GVI7 797 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 hCG_1807616A0A1W2PRN6 198 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 CD300LBA8K4G0 201 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 H0YL77 283 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 MLNRO43193 412 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 KCNAB3O43448 404 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 OR10H3O60404 316 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 PPP1R3DO95685 299 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 IGHV1-69P01742 117 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 MUC1P15941 1255 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-214ENST00000477152 OMGP23515 440 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 RRM2P31350 389 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 PSMB10P40306 273 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 CDKN2AP42771 156 aaKnown RBP6.02□□□□□ -1.45
BRCA1-214ENST00000477152 OMPP47874 163 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 GSK3BP49841 420 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 NUDT2P50583 147 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 BLMHQ13867 455 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 MICBQ29980 383 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 GLYATQ6IB77 296 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 SLC18B1Q6NT16 456 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 BRD3OSQ6XYD6 125 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 BOLLQ8N9W6 283 aaKnown RBP6.02□□□□□ -1.45
BRCA1-214ENST00000477152 SLC26A10Q8NG04 563 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 OR52D1Q9H346 318 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 SPAG4Q9NPE6 437 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 RPRD1BQ9NQG5 326 aaKnown RBP6.02□□□□□ -1.45
BRCA1-214ENST00000477152 TNFRSF19Q9NS68 423 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 UFSP2Q9NUQ7 469 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 KPTNQ9Y664 436 aa6.02□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF785A8K8V0 405 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 BHLHE40O14503 412 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 KRT36O76013 467 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 HLA-DPB1P04440 258 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 MELTFP08582 738 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 FBP1P09467 338 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 CA6P23280 308 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 RPS16P62249 146 aaKnown RBP6.01□□□□□ -1.45
BRCA1-214ENST00000477152 GRB2P62993 217 aaKnown RBP6.01□□□□□ -1.45
BRCA1-214ENST00000477152 SPIBQ01892 262 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 MAB21L1Q13394 359 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 TAF9Q16594 264 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 C2orf68Q2NKX9 166 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 DHRS7BQ6IAN0 325 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-214ENST00000477152 C11orf88Q6PI97 169 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 CORO6Q6QEF8 472 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 PTCHD4Q6ZW05 846 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 GALNT4Q8N4A0 578 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 PAPD5Q8NDF8 572 aaKnown RBP6.01□□□□□ -1.45
BRCA1-214ENST00000477152 PROKR2Q8NFJ6 384 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 TFAP2CQ92754 450 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 NMNAT3Q96T66 252 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 COPS4Q9BT78 406 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 TOR3AQ9H497 397 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 MARCH7Q9H992 704 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 RNPEPL1Q9HAU8 725 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 DCAF13Q9NV06 445 aaKnown RBP6.01□□□□□ -1.45
BRCA1-214ENST00000477152 NDE1Q9NXR1 346 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 ADA2Q9NZK5 511 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 C1RLQ9NZP8 487 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms