RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SLC51BQ86UW2 128 aa14.47□□□□□ -0.09
TMEM53-208ENST00000476724 PNLDC1Q8NA58 520 aaKnown RBP14.47□□□□□ -0.09
TMEM53-208ENST00000476724 MITD1Q8WV92 249 aa14.47□□□□□ -0.09
TMEM53-208ENST00000476724 C10orf35Q96D05 121 aa14.47□□□□□ -0.09
TMEM53-208ENST00000476724 TMEM41AQ96HV5 264 aa14.47□□□□□ -0.09
TMEM53-208ENST00000476724 GPER1Q99527 375 aa14.47□□□□□ -0.09
TMEM53-208ENST00000476724 PIGQQ9BRB3 760 aa14.47□□□□□ -0.09
TMEM53-208ENST00000476724 RDH8Q9NYR8 311 aa14.47□□□□□ -0.09
TMEM53-208ENST00000476724 COMMD9Q9P000 198 aa14.47□□□□□ -0.09
TMEM53-208ENST00000476724 NUP50Q9UKX7 468 aa14.47□□□□□ -0.09
TMEM53-208ENST00000476724 SPAARA0A1B0GVQ0 90 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 OR5H14A6NHG9 310 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 DHHO43323 396 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 SSX5O60225 188 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 TNFSF15O95150 251 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 MPIG6BO95866 241 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 PRF1P14222 555 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 HIST1H1DP16402 221 aaKnown RBP14.46□□□□□ -0.09
TMEM53-208ENST00000476724 THBS4P35443 961 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 ALDH3B1P43353 468 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 CBX5P45973 191 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 TAS2R31P59538 309 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 SSPNQ14714 243 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 SFRP5Q5T4F7 317 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 TMEM164Q5U3C3 297 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 GLRX5Q86SX6 157 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 ZNF546Q86UE3 836 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 OR9K2Q8NGE7 335 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 PCNPQ8WW12 178 aaKnown RBP14.46□□□□□ -0.09
TMEM53-208ENST00000476724 RBPMSQ93062 196 aaKnown RBP14.46□□□□□ -0.09
TMEM53-208ENST00000476724 SGCZQ96LD1 299 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 PHB2Q99623 299 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 SOX7Q9BT81 388 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 SF3B5Q9BWJ5 86 aaKnown RBP14.46□□□□□ -0.09
TMEM53-208ENST00000476724 CST11Q9H112 138 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 TRAV14DV4A0A0A6YYC5 116 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 C9orf170A2RU37 121 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 SLC25A4P12235 298 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 OR3A4PP47883 348 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 IL13RA1P78552 427 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 Q6ZSR3 168 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 TMEM123Q8N131 208 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 OR4K15Q8NH41 348 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 LRRC20Q8TCA0 184 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 SPACA5Q96QH8 159 aa14.46□□□□□ -0.09
TMEM53-208ENST00000476724 hCG_1807616A0A1W2PRN6 198 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 MPGP29372 298 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 DLSTP36957 453 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ZNF84P51523 738 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ARPC4P59998 168 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ENDOGQ14249 297 aaKnown RBP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ZNF345Q14585 488 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 VAX1Q5SQQ9 334 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 RGS7BPQ6MZT1 257 aaPredicted RBP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ARRDC1Q8N5I2 433 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ESX1Q8N693 406 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 TMEM104Q8NE00 496 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 SUN5Q8TC36 379 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 PP6455Q8WZ26 134 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 NABP1Q96AH0 204 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 MRGPRFQ96AM1 343 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ZNF385AQ96PM9 386 aaKnown RBP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 OCSTAMPQ9BR26 566 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 NICN1Q9BSH3 213 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 PDCD10Q9BUL8 212 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 V9GYS6 101 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 DOCK10Q96BY6 2186 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 A0A0A6YYD4 124 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 TERTO14746 1132 aaKnown RBP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 LRP3O75074 770 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 MTRF1O75570 445 aaKnown RBP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 DHRS3O75911 302 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 WDPCPO95876 746 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 NMBP08949 121 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 FTH1P19P0C7X4 201 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ICAM2P13598 275 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 MGMTP16455 207 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 OTX1P32242 354 aaPredicted RBP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 PPP1R1AQ13522 171 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ARL6IP1Q15041 203 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 ZNF468Q5VIY5 522 aaPredicted RBP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 SIGIRRQ6IA17 410 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 C17orf107Q6ZR85 190 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 HOGA1Q86XE5 327 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 FAM89BQ8N5H3 189 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 JSRP1Q96MG2 331 aaPredicted RBP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 LRFN3Q9BTN0 628 aa14.45□□□□□ -0.1
TMEM53-208ENST00000476724 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 FOXD3Q9UJU5 478 aaPredicted RBP14.45□□□□□ -0.1
TMEM53-208ENST00000476724 IGKV1-9A0A0C4DH69 117 aa14.44□□□□□ -0.1
TMEM53-208ENST00000476724 SOCS1O15524 211 aa14.44□□□□□ -0.1
TMEM53-208ENST00000476724 EFSO43281 561 aa14.44□□□□□ -0.1
TMEM53-208ENST00000476724 OR2F2O95006 317 aa14.44□□□□□ -0.1
TMEM53-208ENST00000476724 DUS4LO95620 317 aaKnown RBP14.44□□□□□ -0.1
TMEM53-208ENST00000476724 TMEM50BP56557 158 aa14.44□□□□□ -0.1
TMEM53-208ENST00000476724 OR2F1Q13607 317 aa14.44□□□□□ -0.1
TMEM53-208ENST00000476724 GFOD2Q3B7J2 385 aa14.44□□□□□ -0.1
TMEM53-208ENST00000476724 SLC22A6Q4U2R8 563 aa14.44□□□□□ -0.1
TMEM53-208ENST00000476724 PLAC9Q5JTB6 97 aa14.44□□□□□ -0.1
TMEM53-208ENST00000476724 PHYHD1Q5SRE7 291 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms