RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 DCXRQ7Z4W1 244 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 BEND2Q8NDZ0 799 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 OR4S1Q8NGB4 309 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 CFHR4Q92496 578 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 TNFRSF14Q92956 283 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 C12orf43Q96C57 262 aaKnown RBP16.71■□□□□ 0.27
VPS36-203ENST00000475375 KCTD14Q9BQ13 255 aaPredicted RBP16.71■□□□□ 0.27
VPS36-203ENST00000475375 METTL8Q9H825 291 aaKnown RBP16.71■□□□□ 0.27
VPS36-203ENST00000475375 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.71■□□□□ 0.27
VPS36-203ENST00000475375 SNTG1Q9NSN8 517 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 MAB21L2Q9Y586 359 aa16.71■□□□□ 0.27
VPS36-203ENST00000475375 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.7■□□□□ 0.26
VPS36-203ENST00000475375 CDIPTO14735 213 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 IDH3BO43837 385 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 TIPRLO75663 272 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 TGM4P49221 684 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 GSK3BP49841 420 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 TIGD6Q17RP2 521 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 C8orf46Q8TAG6 207 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 C17orf50Q8WW18 174 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 RORBQ92753 470 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 KCNJ15Q99712 375 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 RAB18Q9NP72 206 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 AURKAIP1Q9NWT8 199 aaPredicted RBP16.7■□□□□ 0.26
VPS36-203ENST00000475375 HAO2Q9NYQ3 351 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 ZNF391Q9UJN7 358 aa16.7■□□□□ 0.26
VPS36-203ENST00000475375 M0R1W7 72 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 SPARCP09486 303 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 NDUFB7P17568 137 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 GNALP38405 381 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 STUMQ69YW2 141 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 LYPD4Q6UWN0 246 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 SLC16A9Q7RTY1 509 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 ZDHHC21Q8IVQ6 265 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 CYB561A3Q8NBI2 242 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 SLAMF6Q96DU3 332 aa16.69■□□□□ 0.26
VPS36-203ENST00000475375 NKX3-1Q99801 234 aaPredicted RBP16.69■□□□□ 0.26
VPS36-203ENST00000475375 PAPOLGQ9BWT3 736 aaKnown RBP16.69■□□□□ 0.26
VPS36-203ENST00000475375 RANBP3Q9H6Z4 567 aaPredicted RBP16.69■□□□□ 0.26
VPS36-203ENST00000475375 SLC25A10Q9UBX3 287 aaPredicted RBP16.69■□□□□ 0.26
VPS36-203ENST00000475375 SF3B6Q9Y3B4 125 aaKnown RBP16.69■□□□□ 0.26
VPS36-203ENST00000475375 ANGPTL7O43827 346 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 GADD45GO95257 159 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 TFF1P04155 84 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 ANXA2P07355 339 aaKnown RBP16.68■□□□□ 0.26
VPS36-203ENST00000475375 AMY2BP19961 511 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 SMIM11AP58511 58 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 SPIBQ01892 262 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 LRRC75BQ2VPJ9 315 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 GFOD2Q3B7J2 385 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 ATPAF1Q5TC12 328 aaPredicted RBP16.68■□□□□ 0.26
VPS36-203ENST00000475375 OR51L1Q8NGJ5 315 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 OR2T4Q8NH00 348 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 SPSB4Q96A44 273 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 DUS3LQ96G46 650 aaKnown RBP16.68■□□□□ 0.26
VPS36-203ENST00000475375 MED30Q96HR3 178 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 REEP6Q96HR9 211 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 FUZQ9BT04 418 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 NPFFR1Q9GZQ6 430 aa16.68■□□□□ 0.26
VPS36-203ENST00000475375 H0YAE9 185 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 FBXO24O75426 580 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 PSKH1P11801 424 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 FAM3AP98173 230 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 ZBTB37Q5TC79 503 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 RP9Q8TA86 221 aaKnown RBP16.67■□□□□ 0.26
VPS36-203ENST00000475375 R3HDM4Q96D70 268 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 C7orf34Q96L11 122 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 DHRS1Q96LJ7 313 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 MICU1Q9BPX6 476 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 HOPXQ9BPY8 73 aaPredicted RBP16.67■□□□□ 0.26
VPS36-203ENST00000475375 DNTTIP1Q9H147 329 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 WDR13Q9H1Z4 485 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 PPP1R3EQ9H7J1 279 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 FGFR1OP2Q9NVK5 253 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 COMMD3-BMI1R4GMX3 469 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 V9GYQ6 96 aa16.67■□□□□ 0.26
VPS36-203ENST00000475375 ANXA2P2A6NMY6 339 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 ZNF878C9JN71 531 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 PAX6P26367 422 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 CX3CR1P49238 355 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 EMX1Q04741 257 aaPredicted RBP16.66■□□□□ 0.26
VPS36-203ENST00000475375 DGUOKQ16854 277 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 VAX1Q5SQQ9 334 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 CPLX4Q7Z7G2 160 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 FAM86B1Q8N7N1 296 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 ZNRF4Q8WWF5 429 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 PHF21AQ96BD5 680 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 GAFA1Q96PS6 74 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 MMP28Q9H239 520 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 ELL3Q9HB65 397 aaPredicted RBP16.66■□□□□ 0.26
VPS36-203ENST00000475375 SAMD4AQ9UPU9 718 aaKnown RBP16.66■□□□□ 0.26
VPS36-203ENST00000475375 RHBDD3Q9Y3P4 386 aa16.66■□□□□ 0.26
VPS36-203ENST00000475375 NDUFAB1O14561 156 aa16.65■□□□□ 0.26
VPS36-203ENST00000475375 SLC22A2O15244 555 aa16.65■□□□□ 0.26
VPS36-203ENST00000475375 COX4I1P13073 169 aa16.65■□□□□ 0.26
VPS36-203ENST00000475375 HSD11B1P28845 292 aa16.65■□□□□ 0.26
VPS36-203ENST00000475375 IFNGR2P38484 337 aa16.65■□□□□ 0.26
VPS36-203ENST00000475375 SLC15A1P46059 708 aa16.65■□□□□ 0.26
VPS36-203ENST00000475375 ENTPD1P49961 510 aa16.65■□□□□ 0.26
VPS36-203ENST00000475375 ZNF788Q6ZQV5 615 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms