RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 RERGQ96A58 199 aaPredicted RBP1.79□□□□□ -2.12
LTN1-204ENST00000475344 RCN3Q96D15 328 aa1.79□□□□□ -2.12
LTN1-204ENST00000475344 KCNS3Q9BQ31 491 aa1.79□□□□□ -2.12
LTN1-204ENST00000475344 SHANK2-AS3Q9BTD1 123 aa1.79□□□□□ -2.12
LTN1-204ENST00000475344 DEFB129Q9H1M3 183 aa1.79□□□□□ -2.12
LTN1-204ENST00000475344 DHX35Q9H5Z1 703 aaKnown RBP1.79□□□□□ -2.12
LTN1-204ENST00000475344 ZNF442Q9H7R0 627 aa1.79□□□□□ -2.12
LTN1-204ENST00000475344 ZC4H2Q9NQZ6 224 aa1.79□□□□□ -2.12
LTN1-204ENST00000475344 MCUBQ9NWR8 336 aa1.79□□□□□ -2.12
LTN1-204ENST00000475344 YARS2Q9Y2Z4 477 aaKnown RBP1.79□□□□□ -2.12
LTN1-204ENST00000475344 CAB39Q9Y376 341 aaPredicted RBP1.79□□□□□ -2.12
LTN1-204ENST00000475344 MUC6Q6W4X9 2439 aa1.79□□□□□ -2.12
LTN1-204ENST00000475344 BTNL10A8MVZ5 291 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 CENPBD1B2RD01 187 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 GOLGA8TH3BQL2 631 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 CASC3O15234 703 aaKnown RBP1.78□□□□□ -2.12
LTN1-204ENST00000475344 DNAJB6O75190 326 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 SCO1O75880 301 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 LHBP01229 141 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 PTHP01270 115 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 HSPD1P10809 573 aaKnown RBP1.78□□□□□ -2.12
LTN1-204ENST00000475344 SFTPCP11686 197 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 SLC1A2P43004 574 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 RAB7AP51149 207 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 NDUFA8P51970 172 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 RPS15AP62244 130 aaKnown RBP1.78□□□□□ -2.12
LTN1-204ENST00000475344 ZNF33AQ06730 810 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 CASP12Q6UXS9 341 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 OTUD6AQ7L8S5 288 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 ZNF101Q8IZC7 436 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 INO80EQ8NBZ0 244 aaPredicted RBP1.78□□□□□ -2.12
LTN1-204ENST00000475344 BBOF1Q8ND07 529 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 OR5AR1Q8NGP9 310 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 KCNS1Q96KK3 526 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 AGMATQ9BSE5 352 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 SFXN3Q9BWM7 321 aa1.78□□□□□ -2.12
LTN1-204ENST00000475344 ADGRA3Q8IWK6 1321 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 IGKV1-27A0A075B6S5 117 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 GOLGA8JA6NMD2 632 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 H0YIV9 168 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 TEX46H3BTG2 121 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 MANBAO00462 879 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 PSPHP1O15172 72 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 CTNSO60931 367 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 IGLV6-57P01721 117 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 KRT16P08779 473 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 GOLGA8HP0CJ92 632 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 CD82P27701 267 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 APLNRP35414 380 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 GPR1P46091 355 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 RPS5P46782 204 aaKnown RBP1.77□□□□□ -2.13
LTN1-204ENST00000475344 UBE2MP61081 183 aaKnown RBP1.77□□□□□ -2.13
LTN1-204ENST00000475344 GBE1Q04446 702 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 SPAG1Q07617 926 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 MAD2L1BPQ15013 274 aaPredicted RBP1.77□□□□□ -2.13
LTN1-204ENST00000475344 C5orf64Q2M2E5 130 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 OPN5Q6U736 354 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 FAM122BQ7Z309 247 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 ZNF664Q8N3J9 261 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 ZNF680Q8NEM1 530 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 GPX8Q8TED1 209 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 DCAKDQ8WVC6 231 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 ASZ1Q8WWH4 475 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 SMARCD1Q96GM5 515 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 CSPG4P5Q96PW8 444 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 OR4K3Q96R72 315 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 UQCC2Q9BRT2 126 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 CSNK1G1Q9HCP0 422 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 IL37Q9NZH6 218 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 ZNF257Q9Y2Q1 563 aa1.77□□□□□ -2.13
LTN1-204ENST00000475344 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
LTN1-204ENST00000475344 JCADQ9P266 1359 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 A0A0A6YYD5 115 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 SUPT3HB4E1H0 165 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 OR7C2O60412 319 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 HSBP1O75506 76 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 SERPINB7O75635 380 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 UPK1BO75841 260 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 FARS2O95363 451 aaKnown RBP1.76□□□□□ -2.13
LTN1-204ENST00000475344 TDP2O95551 362 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 OXTP01178 125 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 TRBV12-3P01733 135 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 IDH2P48735 452 aaKnown RBP1.76□□□□□ -2.13
LTN1-204ENST00000475344 SERPINB8P50452 374 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 CCNG1P51959 295 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 YWHAEP62258 255 aaKnown RBP1.76□□□□□ -2.13
LTN1-204ENST00000475344 TRDNQ13061 729 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 PLCXD3Q63HM9 321 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 ZFAND6Q6FIF0 208 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 PRSS54Q6PEW0 395 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 CLEC2AQ6UVW9 174 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 DRAM1Q8N682 238 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 CDS1Q92903 461 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 NAT6Q93015 286 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 RDH12Q96NR8 316 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 NUDT9Q9BW91 350 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 NCOR1P1Q9H4R4 102 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 PLEKHF2Q9H8W4 249 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 PXMP2Q9NR77 195 aa1.76□□□□□ -2.13
LTN1-204ENST00000475344 PEF1Q9UBV8 284 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms