RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 ITPKCQ96DU7 683 aa10.78□□□□□ -0.68
GAPDH-208ENST00000474249 RAB3IPQ96QF0 476 aaPredicted RBP10.78□□□□□ -0.68
GAPDH-208ENST00000474249 KCNJ15Q99712 375 aa10.78□□□□□ -0.68
GAPDH-208ENST00000474249 SSX3Q99909 188 aa10.78□□□□□ -0.68
GAPDH-208ENST00000474249 OPA3Q9H6K4 179 aa10.78□□□□□ -0.68
GAPDH-208ENST00000474249 RANBP3Q9H6Z4 567 aaPredicted RBP10.78□□□□□ -0.68
GAPDH-208ENST00000474249 METTL8Q9H825 291 aaKnown RBP10.78□□□□□ -0.68
GAPDH-208ENST00000474249 SERTAD4Q9NUC0 356 aa10.78□□□□□ -0.68
GAPDH-208ENST00000474249 HAO2Q9NYQ3 351 aa10.78□□□□□ -0.68
GAPDH-208ENST00000474249 ZNF319Q9P2F9 582 aa10.78□□□□□ -0.68
GAPDH-208ENST00000474249 DNAJB11Q9UBS4 358 aa10.78□□□□□ -0.68
GAPDH-208ENST00000474249 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.77□□□□□ -0.69
GAPDH-208ENST00000474249 HMGB1P1B2RPK0 211 aaPredicted RBP10.77□□□□□ -0.69
GAPDH-208ENST00000474249 CDIPTO14735 213 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 SLC22A2O15244 555 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 NDUFB3O43676 98 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 TIPRLO75663 272 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 TROVE2P10155 538 aaKnown RBP eCLIP10.77□□□□□ -0.693e-6■■■■■ 28.8
GAPDH-208ENST00000474249 SLC2A1P11166 492 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 NCK1P16333 377 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 GRK5P34947 590 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 SLC7A2P52569 658 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 IKZF1Q13422 519 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 FGD3Q5JSP0 725 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 TEX30Q5JUR7 227 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 NCR3LG1Q68D85 454 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 DPY19L4Q7Z388 723 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 DCXRQ7Z4W1 244 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 ZDHHC21Q8IVQ6 265 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 Q8N2B8 174 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 WFDC9Q8NEX5 89 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 OR5T2Q8NGG2 359 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 ANGPTL6Q8NI99 470 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 RP9Q8TA86 221 aaKnown RBP10.77□□□□□ -0.69
GAPDH-208ENST00000474249 FANK1Q8TC84 345 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 RORBQ92753 470 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 GAFA1Q96PS6 74 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 HOPXQ9BPY8 73 aaPredicted RBP10.77□□□□□ -0.69
GAPDH-208ENST00000474249 FGF23Q9GZV9 251 aaPredicted RBP10.77□□□□□ -0.69
GAPDH-208ENST00000474249 WDR13Q9H1Z4 485 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 TOR3AQ9H497 397 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 DCAF13Q9NV06 445 aaKnown RBP10.77□□□□□ -0.69
GAPDH-208ENST00000474249 ABCD2Q9UBJ2 740 aa10.77□□□□□ -0.69
GAPDH-208ENST00000474249 hCG_38984A0A1B0GV85 526 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 TVP23AA6NH52 213 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 XRCC2O43543 280 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 CHST1O43916 411 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 HLA-DQA2P01906 255 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 TFF1P04155 84 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 ACAA1P09110 424 aaPredicted RBP10.76□□□□□ -0.69
GAPDH-208ENST00000474249 PYCR1P32322 319 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 PRKXP51817 358 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 CAV3P56539 151 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.76□□□□□ -0.69
GAPDH-208ENST00000474249 LRRC10Q5BKY1 277 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 KRT74Q7RTS7 529 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 CYB561A3Q8NBI2 242 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 OR9Q1Q8NGQ5 310 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 PHF21AQ96BD5 680 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 IFT27Q9BW83 186 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 NMNAT2Q9BZQ4 307 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 MMP28Q9H239 520 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 CD300AQ9UGN4 299 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 RHBDD3Q9Y3P4 386 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 FAM32AQ9Y421 112 aaKnown RBP10.76□□□□□ -0.69
GAPDH-208ENST00000474249 COMMD3-BMI1R4GMX3 469 aa10.76□□□□□ -0.69
GAPDH-208ENST00000474249 ANKRD30BLA7E2S9 258 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 SIGLEC5O15389 551 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 XPNPEP2O43895 674 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 PAHP00439 452 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 ZNF823P16415 610 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 PAX6P26367 422 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 DCTDP32321 178 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 NAA10P41227 235 aaPredicted RBP10.75□□□□□ -0.69
GAPDH-208ENST00000474249 CBX1P83916 185 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 VAX1Q5SQQ9 334 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 SLC35F1Q5T1Q4 408 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 LYG1Q8N1E2 194 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 LNX2Q8N448 690 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 OR4C13Q8NGP0 309 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 OR10Z1Q8NGY1 313 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 OR8S1Q8NH09 359 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 SLAMF6Q96DU3 332 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 DUS3LQ96G46 650 aaKnown RBP10.75□□□□□ -0.69
GAPDH-208ENST00000474249 FAM234AQ9H0X4 552 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 ZNF702PQ9H963 129 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 CAPN7Q9Y6W3 813 aa10.75□□□□□ -0.69
GAPDH-208ENST00000474249 GSTA4O15217 222 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 CD28P10747 220 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 GSK3AP49840 483 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 EMX1Q04741 257 aaPredicted RBP10.74□□□□□ -0.69
GAPDH-208ENST00000474249 TSPAN31Q12999 210 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 LY6EQ16553 131 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 LRRC75BQ2VPJ9 315 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 FOXB2Q5VYV0 432 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 HACD2Q6Y1H2 254 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 ZNF511Q8NB15 262 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 OR2T6Q8NHC8 308 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 MED30Q96HR3 178 aa10.74□□□□□ -0.69
GAPDH-208ENST00000474249 COPS4Q9BT78 406 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms