RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 GALNT4Q8N4A0 578 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 TMEM163Q8TC26 289 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 C12orf43Q96C57 262 aaKnown RBP17.12■□□□□ 0.33
SNX13-206ENST00000474067 MMP26Q9NRE1 261 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 OPN4Q9UHM6 478 aa17.12■□□□□ 0.33
SNX13-206ENST00000474067 COL6A5A8TX70 2615 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 KIR2DS1A0A191URI9 304 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 TMEM269A0A1B0GVZ9 245 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 ZAR1LA6NP61 321 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 ZNF670-ZNF695F2Z2N8 137 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 ECDO95905 644 aaPredicted RBP17.11■□□□□ 0.33
SNX13-206ENST00000474067 CST4P01036 141 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 FSHBP01225 129 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 ACTG1P63261 375 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 ROM1Q03395 351 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 PAX8Q06710 450 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 WDR25Q64LD2 544 aaPredicted RBP17.11■□□□□ 0.33
SNX13-206ENST00000474067 ZFP1Q6P2D0 407 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 SLC36A1Q7Z2H8 476 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 THAP5Q7Z6K1 395 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 COMMD2Q86X83 199 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 BOLLQ8N9W6 283 aaKnown RBP17.11■□□□□ 0.33
SNX13-206ENST00000474067 PNLDC1Q8NA58 520 aaKnown RBP17.11■□□□□ 0.33
SNX13-206ENST00000474067 BBS1Q8NFJ9 593 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 SEMA6DQ8NFY4 1073 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 OR1M1Q8NGA1 313 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 FAM216AQ8WUB2 273 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 AMELYQ99218 206 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 RBM4BQ9BQ04 359 aaKnown RBP17.11■□□□□ 0.33
SNX13-206ENST00000474067 NUDT16L1Q9BRJ7 211 aaKnown RBP17.11■□□□□ 0.33
SNX13-206ENST00000474067 MS4A7Q9GZW8 240 aaPredicted RBP17.11■□□□□ 0.33
SNX13-206ENST00000474067 IKZF2Q9UKS7 526 aa17.11■□□□□ 0.33
SNX13-206ENST00000474067 ZNF816-ZNF321PA0A0X1KG74 233 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 GPR37O15354 613 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 ADAM20O43506 726 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 CFHR2P36980 270 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 EGR3Q06889 387 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 ZBTB37Q5TC79 503 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 TEX36Q5VZQ5 186 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 TCEANCQ8N8B7 351 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 RFKQ969G6 155 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 OR8B4Q96RC9 309 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 HAO2Q9NYQ3 351 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 KAAG1Q9UBP8 84 aa17.1■□□□□ 0.33
SNX13-206ENST00000474067 WARS2Q9UGM6 360 aaKnown RBP17.1■□□□□ 0.33
SNX13-206ENST00000474067 C3orf80F5H4A9 247 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 PRKYO43930 277 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 VENTXO95231 258 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 PRDX4Q13162 271 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 TMED1Q13445 227 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 C12orf73Q69YU5 71 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 C12orf54Q6X4T0 127 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 KCTD8Q6ZWB6 473 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 ZDHHC23Q8IYP9 409 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 GCSAMQ8N6F7 178 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 OR8B12Q8NGG6 310 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 OR10Z1Q8NGY1 313 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 DVL3Q92997 716 aaPredicted RBP17.09■□□□□ 0.33
SNX13-206ENST00000474067 UPRTQ96BW1 309 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 DMRTB1Q96MA1 342 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 SLC6A7Q99884 636 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 CLN6Q9NWW5 311 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 WNK2Q9Y3S1 2297 aa17.09■□□□□ 0.33
SNX13-206ENST00000474067 MXRA5Q9NR99 2828 aa17.08■□□□□ 0.33
SNX13-206ENST00000474067 LHBP01229 141 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 MRPL3P09001 348 aaKnown RBP17.08■□□□□ 0.32
SNX13-206ENST00000474067 CDC42P60953 191 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 FAM201AQ5SY85 155 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 SFRP4Q6FHJ7 346 aaPredicted RBP17.08■□□□□ 0.32
SNX13-206ENST00000474067 AMIGO2Q86SJ2 522 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 OR8J1Q8NGP2 316 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 LRRC29Q8WV35 223 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 LRTOMTQ8WZ04 291 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 PIGCQ92535 297 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 ITPKCQ96DU7 683 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 MYCBPQ99417 103 aaPredicted RBP17.08■□□□□ 0.32
SNX13-206ENST00000474067 DNTTIP1Q9H147 329 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 TLNRD1Q9H1K6 362 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 DNAJB11Q9UBS4 358 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 NUFIP1Q9UHK0 495 aaKnown RBP17.08■□□□□ 0.32
SNX13-206ENST00000474067 RHBDD3Q9Y3P4 386 aa17.08■□□□□ 0.32
SNX13-206ENST00000474067 FBN1P35555 2871 aaKnown RBP17.07■□□□□ 0.32
SNX13-206ENST00000474067 C5orf63A6NC05 138 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 CCDC182A6NF36 153 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 HAX1O00165 279 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 CD80P33681 288 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 ATP6V1E1P36543 226 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 RIPPLY1Q0D2K3 151 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 GPR157Q5UAW9 335 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 AADACL4Q5VUY2 407 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 ZNF322Q6U7Q0 402 aaPredicted RBP17.07■□□□□ 0.32
SNX13-206ENST00000474067 SLC35F2Q8IXU6 374 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 RNF170Q96K19 258 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 CIB1Q99828 191 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 PKP2Q99959 881 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 GABARAPL3Q9BY60 117 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 PBOV1Q9GZY1 135 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 FAM206AQ9NX38 181 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 ENPP5Q9UJA9 477 aa17.07■□□□□ 0.32
SNX13-206ENST00000474067 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms