RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 WDR25Q64LD2 544 aaPredicted RBP14.95□□□□□ -0.02
UPF3A-203ENST00000474056 KCTD18Q6PI47 426 aaPredicted RBP14.95□□□□□ -0.02
UPF3A-203ENST00000474056 MEPCEQ7L2J0 689 aaKnown RBP14.95□□□□□ -0.02
UPF3A-203ENST00000474056 C11orf53Q8IXP5 236 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.95□□□□□ -0.02
UPF3A-203ENST00000474056 OR1M1Q8NGA1 313 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 PYDC1Q8WXC3 89 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 ITPKCQ96DU7 683 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 CENPNQ96H22 339 aaPredicted RBP14.95□□□□□ -0.02
UPF3A-203ENST00000474056 IL4I1Q96RQ9 567 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 CNN2Q99439 309 aaKnown RBP14.95□□□□□ -0.02
UPF3A-203ENST00000474056 FAM206AQ9NX38 181 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 CLN8Q9UBY8 286 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 OAZ3Q9UMX2 235 aa14.95□□□□□ -0.02
UPF3A-203ENST00000474056 OOEPA6NGQ2 149 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 PHYHO14832 338 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 POLR2IP36954 125 aaKnown RBP14.94□□□□□ -0.02
UPF3A-203ENST00000474056 GNALP38405 381 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 DEGS2Q6QHC5 323 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 BTNL3Q6UXE8 466 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 USP43Q70EL4 1123 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 RAB40AQ8WXH6 277 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 OR8B4Q96RC9 309 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 MROQ9BYG7 248 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 H2AFY2Q9P0M6 372 aaPredicted RBP14.94□□□□□ -0.02
UPF3A-203ENST00000474056 ENOPH1Q9UHY7 261 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 TMEM14AQ9Y6G1 99 aa14.94□□□□□ -0.02
UPF3A-203ENST00000474056 ANK2Q01484 3957 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 TRAV38-1A0A0B4J264 116 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 SLC22A31A6NKX4 558 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 ZNF850A8MQ14 1090 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 TNFRSF13BO14836 293 aaPredicted RBP14.93□□□□□ -0.02
UPF3A-203ENST00000474056 LHBP01229 141 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 GYPAP02724 150 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 PRDX4Q13162 271 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 WDR82Q6UXN9 313 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 CCDC121Q6ZUS5 278 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 FAM90A1Q86YD7 464 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 SLC35F2Q8IXU6 374 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 ZNF679Q8IYX0 411 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 BPIFB2Q8N4F0 458 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 LRRC29Q8WV35 223 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 ASB17Q8WXJ9 295 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 TECTBQ96PL2 329 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 NUDT16L1Q9BRJ7 211 aaKnown RBP14.93□□□□□ -0.02
UPF3A-203ENST00000474056 SUCNR1Q9BXA5 334 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 FGF23Q9GZV9 251 aaPredicted RBP14.93□□□□□ -0.02
UPF3A-203ENST00000474056 RIBC2Q9H4K1 309 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 ADGRL4Q9HBW9 690 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 ZNF391Q9UJN7 358 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 IKZF2Q9UKS7 526 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 MPC1Q9Y5U8 109 aa14.93□□□□□ -0.02
UPF3A-203ENST00000474056 IGHV3OR15-7A0A075B7D8 119 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 TMEM269A0A1B0GVZ9 245 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 ANXA2P2A6NMY6 339 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 C22orf46C9J442 243 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 ADAM20O43506 726 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 RIDAP52758 137 aaKnown RBP14.92□□□□□ -0.02
UPF3A-203ENST00000474056 CXCR4P61073 352 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 ACTR3P61158 418 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 ROM1Q03395 351 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 POU4F2Q12837 409 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 KPNB1Q14974 876 aaKnown RBP14.92□□□□□ -0.02
UPF3A-203ENST00000474056 KCNJ8Q15842 424 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 SNCBQ16143 134 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 TEX36Q5VZQ5 186 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 GID4Q8IVV7 300 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 FTMTQ8N4E7 242 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 HPSE2Q8WWQ2 592 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 PIGCQ92535 297 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 PPP1R14AQ96A00 147 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 MICU1Q9BPX6 476 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 OSBPL10Q9BXB5 764 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 GABARAPL3Q9BY60 117 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 PBOV1Q9GZY1 135 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 TLNRD1Q9H1K6 362 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 RNPEPL1Q9HAU8 725 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 SMURF1Q9HCE7 757 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 ESM1Q9NQ30 184 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 ERVK-18Q9QC07 812 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 ZNF69Q9UC07 566 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 NUP50Q9UKX7 468 aa14.92□□□□□ -0.02
UPF3A-203ENST00000474056 A0A0U1RQV5 110 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 ACOD1A6NK06 481 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 CDIPTO14735 213 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 MAGEB4O15481 346 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-203ENST00000474056 ZNF254O75437 659 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 FCN3O75636 299 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 CST4P01036 141 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 DCTDP32321 178 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 NPY4RP50391 375 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 ELF3P78545 371 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-203ENST00000474056 IL5RAQ01344 420 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 MFGE8Q08431 387 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-203ENST00000474056 ZNF829Q3KNS6 432 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-203ENST00000474056 ZNF322Q6U7Q0 402 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-203ENST00000474056 PLEKHG7Q6ZR37 379 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 GALNT4Q8N4A0 578 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 OR51G2Q8NGK0 314 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 FAM81AQ8TBF8 368 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms