RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 OR8B8Q15620 311 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 ESCO2Q56NI9 601 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 FAM201AQ5SY85 155 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 DCAF12L2Q5VW00 463 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 KCTD8Q6ZWB6 473 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 DEFB108BQ8NET1 73 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 OR4M2Q8NGB6 313 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 OR51E1Q8TCB6 317 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 FAM71F1Q96KD3 344 aaPredicted RBP11.94□□□□□ -0.5
VAMP4-203ENST00000474047 LYZL4Q96KX0 146 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 RTL8AQ9BWD3 113 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 TMEM165Q9HC07 324 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 MIOXQ9UGB7 285 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 R4GMQ9 66 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 ABCA2Q9BZC7 2435 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 A0A1W2PQL4 384 aaPredicted RBP11.94□□□□□ -0.5
VAMP4-203ENST00000474047 PRR32B1ATL7 298 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 MPZL2O60487 215 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 MTRF1O75570 445 aaKnown RBP11.94□□□□□ -0.5
VAMP4-203ENST00000474047 RPS2P15880 293 aaKnown RBP11.94□□□□□ -0.5
VAMP4-203ENST00000474047 PRDX4Q13162 271 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 KCNJ8Q15842 424 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 PLEKHG7Q6ZR37 379 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 NLRC3Q7RTR2 1065 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 FAM220AQ7Z4H9 259 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 GALNT4Q8N4A0 578 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 SEMA6DQ8NFY4 1073 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 RNFT2Q96EX2 444 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 Q96MT0 163 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 MBOAT4Q96T53 435 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 MOB1AQ9H8S9 216 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 GPR84Q9NQS5 396 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 NUFIP1Q9UHK0 495 aaKnown RBP11.94□□□□□ -0.5
VAMP4-203ENST00000474047 OR52A1Q9UKL2 312 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 SNX5Q9Y5X3 404 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 JMJD1CQ15652 2540 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 LOC100130705A0A1B0GUX0 176 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 METTL15A6NJ78 407 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 CEACAM18A8MTB9 384 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 PNPP00491 289 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 ATP6V1B1P15313 513 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 MFGE8Q08431 387 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-203ENST00000474047 RIPPLY1Q0D2K3 151 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 OCLNQ16625 522 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 LRRC36Q1X8D7 754 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 SFRP4Q6FHJ7 346 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-203ENST00000474047 ZNF826PQ6ZT77 177 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 TEX29Q8N6K0 151 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 C19orf18Q8NEA5 215 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 ITFG2Q969R8 447 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 RNF170Q96K19 258 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 TMEM246Q9BRR3 403 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 FAM118AQ9NWS6 357 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 MRM2Q9UI43 246 aaKnown RBP11.93□□□□□ -0.5
VAMP4-203ENST00000474047 PCDHGB1Q9Y5G3 927 aa11.93□□□□□ -0.5
VAMP4-203ENST00000474047 ZNF816-ZNF321PA0A0X1KG74 233 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 DAPL1A0PJW8 107 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 ANKRD65E5RJM6 399 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 PTBP3O95758 552 aaKnown RBP11.92□□□□□ -0.5
VAMP4-203ENST00000474047 CST4P01036 141 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 GATA3P23771 443 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 CPT2P23786 658 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 ACKR3P25106 362 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 GNB2P62879 340 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 ACTC1P68032 377 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 ACTA1P68133 377 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 RCN1Q15293 331 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 ZNF404Q494X3 552 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 SLC25A30Q5SVS4 291 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 SSX6Q7RTT6 188 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 ZDHHC23Q8IYP9 409 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 OR1M1Q8NGA1 313 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 OR8B3Q8NGG8 313 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 PPP1R14AQ96A00 147 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 NEIL1Q96FI4 390 aaPredicted RBP11.92□□□□□ -0.5
VAMP4-203ENST00000474047 OR8B2Q96RD0 313 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 ADI1Q9BV57 179 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 TRIM36Q9NQ86 728 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 SMPD3Q9NY59 655 aaPredicted RBP11.92□□□□□ -0.5
VAMP4-203ENST00000474047 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 GNG8Q9UK08 70 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 PIGLQ9Y2B2 252 aa11.92□□□□□ -0.5
VAMP4-203ENST00000474047 TRAV38-1A0A0B4J264 116 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 KIAA1324LA8MWY0 1029 aaPredicted RBP11.91□□□□□ -0.5
VAMP4-203ENST00000474047 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 LGALS8O00214 317 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 SULT1C4O75897 302 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 FSTL3O95633 263 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 WNT2P09544 360 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 CD80P33681 288 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 DCDC5Q6ZRR9 648 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 ELMOD2Q8IZ81 293 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 MRPL48Q96GC5 212 aaKnown RBP11.91□□□□□ -0.5
VAMP4-203ENST00000474047 MYCBPQ99417 103 aaPredicted RBP11.91□□□□□ -0.5
VAMP4-203ENST00000474047 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
VAMP4-203ENST00000474047 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 PPP1R3EQ9H7J1 279 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 AASSQ9UDR5 926 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 ENPP5Q9UJA9 477 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 LRCH1Q9Y2L9 728 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms