RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 GABRA4P48169 554 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 CAMLGP49069 296 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 ZNF41P51814 821 aaPredicted RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 SNU13P55769 128 aaKnown RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 FOXK1P85037 733 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 IL13RA2Q14627 380 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 KCNMB1Q16558 191 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 TMEM268Q5VZI3 342 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 FAM89BQ8N5H3 189 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 CCDC71LQ8N9Z2 235 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 C11orf40Q8WZ69 217 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 BADQ92934 168 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 MRGPRFQ96AM1 343 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 MRGPRX4Q96LA9 322 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 CMSS1Q9BQ75 279 aaKnown RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 CRB3Q9BUF7 120 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 SUCNR1Q9BXA5 334 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 TMPRSS5Q9H3S3 457 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 ESRP2Q9H6T0 727 aaKnown RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 LMAN1LQ9HAT1 526 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 KCNJ16Q9NPI9 418 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 GSKIPQ9P0R6 139 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 KLHL13Q9P2N7 655 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 COL5A1P20908 1838 aaPredicted RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 C5orf52A6NGY3 159 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 DEDDO75618 318 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 IGLV3-19P01714 112 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 HKR1P10072 659 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 NME2P22392 152 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 ZNF84P51523 738 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 GABREP78334 506 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 FZD2Q14332 565 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 ABHD12BQ7Z5M8 362 aaPredicted RBP5.42□□□□□ -1.54
HERC4-209ENST00000473533 C1QL4Q86Z23 238 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 LINC00346Q8IVM7 164 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 NOXO1Q8NFA2 376 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 PPP1R14AQ96A00 147 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 ADAT3Q96EY9 351 aaPredicted RBP5.42□□□□□ -1.54
HERC4-209ENST00000473533 POM121Q96HA1 1249 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 GPR27Q9NS67 375 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 PCDHGA1Q9Y5H4 931 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 HEATR5AQ86XA9 2040 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 C2orf16Q68DN1 1984 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 CACNA1CQ13936 2221 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 ALPK2Q86TB3 2170 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 TCRBV21S2A2A0A5A6 115 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 MEX3AA1L020 520 aaKnown RBP5.42□□□□□ -1.54
HERC4-209ENST00000473533 UMAD1C9J7I0 102 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 MS4A18H0YCH9 400 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 H0YIZ8 118 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 M0R036 132 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 EIF3GO75821 320 aaKnown RBP eCLIP5.42□□□□□ -1.54
HERC4-209ENST00000473533 AGAP20933 346 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 EIF2S3P41091 472 aaKnown RBP5.42□□□□□ -1.54
HERC4-209ENST00000473533 PPP1CAP62136 330 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 IL15RAQ13261 267 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 NSDHLQ15738 373 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 MS4A18Q3C1V0 323 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 ABCA11PQ4W5N1 156 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 PARM1Q6UWI2 310 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 KMT5CQ86Y97 462 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 PRR22Q8IZ63 422 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 OR5L2Q8NGL0 311 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 TMEM230Q96A57 120 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 CMBLQ96DG6 245 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 RRNAD1Q96FB5 475 aaKnown RBP5.42□□□□□ -1.54
HERC4-209ENST00000473533 ABHD14BQ96IU4 210 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 SPIN2AQ99865 258 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 SPIN2BQ9BPZ2 258 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 TM2D1Q9BX74 207 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 OR5AC2Q9NZP5 309 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 CACFD1Q9UGQ2 172 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 MMP17Q9ULZ9 603 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 STARD10Q9Y365 291 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 ZNF726A6NNF4 738 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 HSPA12AO43301 675 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 GMFGO60234 142 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 NAT2P11245 290 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 OR1D4P47884 311 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 P2RY1P47900 373 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 KCNJ3P48549 501 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 ZNF266Q14584 549 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 GUK1Q16774 197 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 RPL7L1Q6DKI1 246 aaKnown RBP5.42□□□□□ -1.54
HERC4-209ENST00000473533 TTLL10Q6ZVT0 673 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 C9orf40Q8IXQ3 194 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 ZNF283Q8N7M2 679 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 ZNF441Q8N8Z8 693 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 PLPP5Q8NEB5 264 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 OR51E1Q8TCB6 317 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 HIST1H2BAQ96A08 127 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 FOXN4Q96NZ1 517 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 RTBDNQ9BSG5 229 aaPredicted RBP5.42□□□□□ -1.54
HERC4-209ENST00000473533 ARV1Q9H2C2 271 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 CHRDQ9H2X0 955 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 RYDENQ9NUL5 291 aaKnown RBP5.42□□□□□ -1.54
HERC4-209ENST00000473533 NECAP2Q9NVZ3 263 aa5.42□□□□□ -1.54
HERC4-209ENST00000473533 AP4M1O00189 453 aa5.41□□□□□ -1.54
HERC4-209ENST00000473533 ZNF217O75362 1048 aa5.41□□□□□ -1.54
HERC4-209ENST00000473533 F10P00742 488 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms