RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ARL2BPQ9Y2Y0 163 aa11.17□□□□□ -0.62
CHD3-209ENST00000473376 ANXA2P2A6NMY6 339 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 GLCEO94923 617 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 CST4P01036 141 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 FBP1P09467 338 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 PSKH1P11801 424 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 OMGP23515 440 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 GNALP38405 381 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 OPRL1P41146 370 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 GSK3AP49840 483 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 ARF6P62330 175 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 DEFA6Q01524 100 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 LRRC10Q5BKY1 277 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 RUSC1-AS1Q66K80 236 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 OR2T5Q6IEZ7 315 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 LCN8Q6JVE9 175 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 ZNF826PQ6ZT77 177 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 PIGWQ7Z7B1 504 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 BOLLQ8N9W6 283 aaKnown RBP11.16□□□□□ -0.62
CHD3-209ENST00000473376 OR51L1Q8NGJ5 315 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 OR9Q1Q8NGQ5 310 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 OR2T29Q8NH02 315 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 LINC01006Q8NI28 216 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 LRRC29Q8WV35 223 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 LHX4Q969G2 390 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 ITPKCQ96DU7 683 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 MED30Q96HR3 178 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 MICU1Q9BPX6 476 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 ABHD6Q9BV23 337 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 REEP1Q9H902 201 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 PDP1Q9P0J1 537 aaPredicted RBP11.16□□□□□ -0.62
CHD3-209ENST00000473376 FAM96BQ9Y3D0 163 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 RNF114Q9Y508 228 aa11.16□□□□□ -0.62
CHD3-209ENST00000473376 TCRBV5S2A0A599 114 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 C5orf63A6NC05 138 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 ACOD1A6NK06 481 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 NDUFB3O43676 98 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 GPR137BO60478 399 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 FCN3O75636 299 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 TSPAN9O75954 239 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 SLC2A1P11166 492 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 PAICSP22234 425 aaKnown RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 EEF1B2P24534 225 aaKnown RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 GSTT1P30711 240 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 MSX2P35548 267 aaPredicted RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 TGFBR2P37173 567 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 CAV3P56539 151 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 PROK1P58294 105 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 ACSM1Q08AH1 577 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 DBPQ10586 325 aaPredicted RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 EIF2B1Q14232 305 aaKnown RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 TRIM25Q14258 630 aaKnown RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 FAM98BQ52LJ0 330 aaKnown RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 WDR38Q5JTN6 314 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 STUMQ69YW2 141 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 BRICD5Q6PL45 260 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 LYPD4Q6UWN0 246 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 WDR86Q86TI4 376 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 DTX3Q8N9I9 347 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 SCCPDHQ8NBX0 429 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 PAPD5Q8NDF8 572 aaKnown RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 OR6K6Q8NGW6 343 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 OR4Q3Q8NH05 313 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 OR5R1Q8NH85 324 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 DCTN5Q9BTE1 182 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 RTL8AQ9BWD3 113 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 ARL8BQ9NVJ2 186 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 HAO2Q9NYQ3 351 aa11.15□□□□□ -0.62
CHD3-209ENST00000473376 SAMHD1Q9Y3Z3 626 aaKnown RBP11.15□□□□□ -0.62
CHD3-209ENST00000473376 A0A0U1RQK1 487 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 BTBD17A6NE02 478 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 M0R1W7 72 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 TBX1O43435 398 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 ANXA2P07355 339 aaKnown RBP11.14□□□□□ -0.63
CHD3-209ENST00000473376 ANOS1P23352 680 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 ZNF121P58317 390 aaPredicted RBP11.14□□□□□ -0.63
CHD3-209ENST00000473376 TAF9Q16594 264 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 KLHL12Q53G59 568 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 NCR3LG1Q68D85 454 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 C11orf88Q6PI97 169 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 DEGS2Q6QHC5 323 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 VMO1Q7Z5L0 202 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 DHFR2Q86XF0 187 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 TIGD4Q8IY51 512 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 OTOSQ8NHW6 89 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 TEX47Q8TBZ9 253 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 ST8SIA4Q92187 359 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 RAB3IPQ96QF0 476 aaPredicted RBP11.14□□□□□ -0.63
CHD3-209ENST00000473376 PAPOLGQ9BWT3 736 aaKnown RBP11.14□□□□□ -0.63
CHD3-209ENST00000473376 RASSF4Q9H2L5 321 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 ZNRD1Q9P1U0 126 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 VPREB3Q9UKI3 123 aa11.14□□□□□ -0.63
CHD3-209ENST00000473376 CDIPTO14735 213 aa11.13□□□□□ -0.63
CHD3-209ENST00000473376 PRODHO43272 600 aa11.13□□□□□ -0.63
CHD3-209ENST00000473376 IGHV4-59P01825 116 aa11.13□□□□□ -0.63
CHD3-209ENST00000473376 GYPBP06028 91 aa11.13□□□□□ -0.63
CHD3-209ENST00000473376 RAP2AP10114 183 aa11.13□□□□□ -0.63
CHD3-209ENST00000473376 ATP6V1B1P15313 513 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms