RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 MXRA5Q9NR99 2828 aa13.05□□□□□ -0.32
MRPL55-226ENST00000473066 TMEM269A0A1B0GVZ9 245 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 OOEPA6NGQ2 149 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 ACOD1A6NK06 481 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 ZNF670-ZNF695F2Z2N8 137 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 C3orf80F5H4A9 247 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 TRAPPC2LH3BP13 241 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 PSMD9O00233 223 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 RGS9O75916 674 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-226ENST00000473066 ZFP1Q6P2D0 407 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 ASRGL1Q7L266 308 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 SLC35F2Q8IXU6 374 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 C10orf67Q8IYJ2 551 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 ZNF679Q8IYX0 411 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 PYDC1Q8WXC3 89 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 OR8B4Q96RC9 309 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 IL4I1Q96RQ9 567 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 MMP26Q9NRE1 261 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 ERVK-18Q9QC07 812 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 GTF2A1LQ9UNN4 478 aa13.04□□□□□ -0.32
MRPL55-226ENST00000473066 IGHV2-70DA0A0C4DH43 119 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 EBAG9O00559 213 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 ADAM20O43506 726 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 NDUFA2O43678 99 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 MAP2K3P46734 347 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 NPY4RP50391 375 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 HCCSP53701 268 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 PRDX4Q13162 271 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-226ENST00000473066 RBMS3Q6XE24 437 aaKnown RBP13.03□□□□□ -0.32
MRPL55-226ENST00000473066 ZNF826PQ6ZT77 177 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 KCTD8Q6ZWB6 473 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 THAP5Q7Z6K1 395 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 ZDHHC23Q8IYP9 409 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 LRRC29Q8WV35 223 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 HIST1H2AAQ96QV6 131 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 MOB1AQ9H8S9 216 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 RNPEPL1Q9HAU8 725 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 ZNF319Q9P2F9 582 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 OPN4Q9UHM6 478 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 RHBDD3Q9Y3P4 386 aa13.03□□□□□ -0.32
MRPL55-226ENST00000473066 CUBNO60494 3623 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 A0A0U1RQV5 110 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 TMEM210A6NLX4 147 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 TRIM77I1YAP6 450 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 ENSAO43768 121 aaKnown RBP13.02□□□□□ -0.33
MRPL55-226ENST00000473066 EPHA2P29317 976 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 DCTDP32321 178 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 CDC42P60953 191 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 CXCR4P61073 352 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 ROM1Q03395 351 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 POU4F2Q12837 409 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 KPNB1Q14974 876 aaKnown RBP13.02□□□□□ -0.33
MRPL55-226ENST00000473066 AADACL4Q5VUY2 407 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 WDR25Q64LD2 544 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-226ENST00000473066 ZNF322Q6U7Q0 402 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-226ENST00000473066 LYPD2Q6UXB3 125 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 BCDIN3DQ7Z5W3 292 aaKnown RBP13.02□□□□□ -0.33
MRPL55-226ENST00000473066 GCSAMQ8N6F7 178 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 OR1M1Q8NGA1 313 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 RAB40AQ8WXH6 277 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 PIGCQ92535 297 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 ITFG2Q969R8 447 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 SLC6A7Q99884 636 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 NUDT16L1Q9BRJ7 211 aaKnown RBP13.02□□□□□ -0.33
MRPL55-226ENST00000473066 GABARAPL3Q9BY60 117 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 IMPAD1Q9NX62 359 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 WARS2Q9UGM6 360 aaKnown RBP13.02□□□□□ -0.33
MRPL55-226ENST00000473066 NUP50Q9UKX7 468 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 COPS3Q9UNS2 423 aa13.02□□□□□ -0.33
MRPL55-226ENST00000473066 ZNF816-ZNF321PA0A0X1KG74 233 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 ZNF850A8MQ14 1090 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 LOC110117498-PIK3R3F6TDL0 507 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 VENTXO95231 258 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 CST4P01036 141 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 FSHBP01225 129 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 ATP6V1B1P15313 513 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 ATP6V1E1P36543 226 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 HILS1P60008 231 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 ACTG1P63261 375 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 CSNK2BP67870 215 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 MICBQ29980 383 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 BCL2L15Q5TBC7 163 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 CD276Q5ZPR3 534 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 USP43Q70EL4 1123 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 GALNT4Q8N4A0 578 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 SEMA6DQ8NFY4 1073 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 OR51G2Q8NGK0 314 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 OR8J1Q8NGP2 316 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 ZFAND2BQ8WV99 257 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 RFKQ969G6 155 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 ITPKCQ96DU7 683 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 FAM71F1Q96KD3 344 aaPredicted RBP13.01□□□□□ -0.33
MRPL55-226ENST00000473066 PKP2Q99959 881 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 PBOV1Q9GZY1 135 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 ADGRL4Q9HBW9 690 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 CLN6Q9NWW5 311 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 FAM206AQ9NX38 181 aa13.01□□□□□ -0.33
MRPL55-226ENST00000473066 NUFIP1Q9UHK0 495 aaKnown RBP13.01□□□□□ -0.33
MRPL55-226ENST00000473066 FBN1P35555 2871 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms