RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 DPY19L2P2Q6ZN68 376 aa15.35■□□□□ 0.05
SORT1-203ENST00000471996 MED30Q96HR3 178 aa15.35■□□□□ 0.05
SORT1-203ENST00000471996 FAM46AQ96IP4 442 aaKnown RBP15.35■□□□□ 0.05
SORT1-203ENST00000471996 MAP6Q96JE9 813 aa15.35■□□□□ 0.05
SORT1-203ENST00000471996 GAFA1Q96PS6 74 aa15.35■□□□□ 0.05
SORT1-203ENST00000471996 SNTG1Q9NSN8 517 aa15.35■□□□□ 0.05
SORT1-203ENST00000471996 TMEM5Q9Y2B1 443 aa15.35■□□□□ 0.05
SORT1-203ENST00000471996 NKX6-3A6NJ46 265 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 ANKRD30BLA7E2S9 258 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 VGLL3A8MV65 326 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 TIPRLO75663 272 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 NDUFB7P17568 137 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 OTX1P32242 354 aaPredicted RBP15.34■□□□□ 0.05
SORT1-203ENST00000471996 DDOSTP39656 456 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 MAGOHP61326 146 aaKnown RBP15.34■□□□□ 0.05
SORT1-203ENST00000471996 RRM2BQ7LG56 351 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 OR8J3Q8NGG0 315 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 OPA3Q9H6K4 179 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 TCF19Q9Y242 345 aa15.34■□□□□ 0.05
SORT1-203ENST00000471996 TRBV23-1A0A0A0MS06 115 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 CDIPTO14735 213 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 TFF1P04155 84 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 IFNW1P05000 195 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 FXYD6P3P58550 94 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 GMFBP60983 142 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 DRAM2Q6UX65 266 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 Q6ZS46 218 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 MKXQ8IYA7 352 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 OR5AU1Q8NGC0 362 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 ANGPTL6Q8NI99 470 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 RAB3IPQ96QF0 476 aaPredicted RBP15.33■□□□□ 0.04
SORT1-203ENST00000471996 TLNRD1Q9H1K6 362 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 WDR13Q9H1Z4 485 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 INPP5EQ9NRR6 644 aa15.33■□□□□ 0.04
SORT1-203ENST00000471996 A6NDX4 124 aa15.32■□□□□ 0.04
SORT1-203ENST00000471996 SIGLEC5O15389 551 aa15.32■□□□□ 0.04
SORT1-203ENST00000471996 VDAC2P45880 294 aaPredicted RBP15.32■□□□□ 0.04
SORT1-203ENST00000471996 RAB13P51153 203 aa15.32■□□□□ 0.04
SORT1-203ENST00000471996 RNF144BQ7Z419 303 aa15.32■□□□□ 0.04
SORT1-203ENST00000471996 VTCN1Q7Z7D3 282 aa15.32■□□□□ 0.04
SORT1-203ENST00000471996 ZBTB46Q86UZ6 589 aa15.32■□□□□ 0.04
SORT1-203ENST00000471996 NMNAT3Q96T66 252 aa15.32■□□□□ 0.04
SORT1-203ENST00000471996 MUC13Q9H3R2 512 aa15.32■□□□□ 0.04
SORT1-203ENST00000471996 HEXA-AS1Q9H8Q6 139 aa15.32■□□□□ 0.04
SORT1-203ENST00000471996 GLCEO94923 617 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 HLA-DQA2P01906 255 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 ACAA1P09110 424 aaPredicted RBP15.31■□□□□ 0.04
SORT1-203ENST00000471996 TROVE2P10155 538 aaKnown RBP eCLIP15.31■□□□□ 0.04
SORT1-203ENST00000471996 LGALS4P56470 323 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 MXRA7P84157 204 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 KLHL22Q53GT1 634 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 ARSJQ5FYB0 599 aaPredicted RBP15.31■□□□□ 0.04
SORT1-203ENST00000471996 TMEM219Q86XT9 240 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 CYB561A3Q8NBI2 242 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 OR10Z1Q8NGY1 313 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 DPF1Q92782 380 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 SPSB4Q96A44 273 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 RSRC1Q96IZ7 334 aaKnown RBP15.31■□□□□ 0.04
SORT1-203ENST00000471996 ANKRD19PQ9H560 264 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 ELL3Q9HB65 397 aaPredicted RBP15.31■□□□□ 0.04
SORT1-203ENST00000471996 RPRD1BQ9NQG5 326 aaKnown RBP15.31■□□□□ 0.04
SORT1-203ENST00000471996 MRPL22Q9NWU5 206 aaKnown RBP15.31■□□□□ 0.04
SORT1-203ENST00000471996 KCNG2Q9UJ96 466 aa15.31■□□□□ 0.04
SORT1-203ENST00000471996 FAM90A8PA6NJQ4 464 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 FXYD1O00168 92 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 XRCC2O43543 280 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 SYNGR1O43759 233 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 RENP00797 406 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 ALDOBP05062 364 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 BLCAPP62952 87 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 TMEM95Q3KNT9 176 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 FAM185AQ8N0U4 392 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 DYNAPQ8N1N2 210 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 ERMAPQ96PL5 475 aaPredicted RBP15.3■□□□□ 0.04
SORT1-203ENST00000471996 GPR61Q9BZJ8 451 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 PITPNC1Q9UKF7 332 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 PCDHGB5Q9Y5G0 923 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 TSSC4Q9Y5U2 329 aaPredicted RBP15.3■□□□□ 0.04
SORT1-203ENST00000471996 TENM2Q9NT68 2774 aa15.3■□□□□ 0.04
SORT1-203ENST00000471996 TCRBV4S1A1TA0A5B7 111 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 SLC2A1P11166 492 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 OMPP47874 163 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 PRKXP51817 358 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 FAM3AP98173 230 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 SPIBQ01892 262 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 PLA1AQ53H76 456 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 TCTEX1D4Q5JR98 221 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 CCDC121Q6ZUS5 278 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 LHFPL4Q7Z7J7 247 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 OR5K1Q8NHB7 308 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 NSRP1Q9H0G5 558 aaKnown RBP15.29■□□□□ 0.04
SORT1-203ENST00000471996 PPP1R3EQ9H7J1 279 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 N6AMT1Q9Y5N5 214 aa15.29■□□□□ 0.04
SORT1-203ENST00000471996 DNAH7Q8WXX0 4024 aa15.28■□□□□ 0.04
SORT1-203ENST00000471996 FAM220BPB1ANY3 271 aa15.28■□□□□ 0.04
SORT1-203ENST00000471996 CLIC3O95833 236 aa15.28■□□□□ 0.04
SORT1-203ENST00000471996 HIST1H1CP16403 213 aaKnown RBP15.28■□□□□ 0.04
SORT1-203ENST00000471996 ZNF823P16415 610 aa15.28■□□□□ 0.04
SORT1-203ENST00000471996 COX7A1P24310 79 aa15.28■□□□□ 0.04
SORT1-203ENST00000471996 NOS3P29474 1203 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms