RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 THBS2P35442 1172 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 PEX19P40855 299 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 RAD52P43351 418 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 SOX2P48431 317 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 FABP6P51161 128 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 Q499Y3 187 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 GPR107Q5VW38 600 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 UTS2BQ765I0 119 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 TGIF2LYQ8IUE0 185 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 ZCCHC24Q8N2G6 241 aaKnown RBP8.41□□□□□ -1.06
SF3A1-207ENST00000471342 MS4A15Q8N5U1 240 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 GPR148Q8TDV2 347 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 AKAP1Q92667 903 aaKnown RBP eCLIP8.41□□□□□ -1.06
SF3A1-207ENST00000471342 ITPKCQ96DU7 683 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 LIME1Q9H400 295 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 TAS2R4Q9NYW5 299 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 SCOCQ9UIL1 159 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF391Q9UJN7 358 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 HHLA2Q9UM44 414 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 RNF115Q9Y4L5 304 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 N6AMT1Q9Y5N5 214 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 DOPEY2Q9Y3R5 2298 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 IGKV1-12A0A0C4DH73 117 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 H3BMQ9 156 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 SYT7O43581 403 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 GATBO75879 557 aaKnown RBP8.4□□□□□ -1.06
SF3A1-207ENST00000471342 RGS9O75916 674 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-207ENST00000471342 IGKV1D-12P01611 117 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 CD3EP07766 207 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 OR4A8P0C604 315 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 SELEP16581 610 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 TTKP33981 857 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 RPS19P39019 145 aaKnown RBP8.4□□□□□ -1.06
SF3A1-207ENST00000471342 EVX1P49640 407 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 OR10A3P58181 314 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 PLA2G7Q13093 441 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 ZBTB37Q5TC79 503 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 C22orf42Q6IC83 251 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 C1QL2Q7Z5L3 287 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 CEACAM19Q7Z692 300 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF676Q8N7Q3 588 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 OR8G5Q8NG78 346 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 DVL3Q92997 716 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-207ENST00000471342 PIGTQ969N2 578 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 TMEM106AQ96A25 262 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 C10orf35Q96D05 121 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 C14orf79Q96F83 325 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 MRPL48Q96GC5 212 aaKnown RBP8.4□□□□□ -1.06
SF3A1-207ENST00000471342 RADILQ96JH8 1075 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 DHRS9Q9BPW9 319 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 SYT3Q9BQG1 590 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 CHST5Q9GZS9 411 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 ESRP2Q9H6T0 727 aaKnown RBP8.4□□□□□ -1.06
SF3A1-207ENST00000471342 CISD1Q9NZ45 108 aaKnown RBP8.4□□□□□ -1.06
SF3A1-207ENST00000471342 PLEKHB1Q9UF11 243 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-207ENST00000471342 GPR160Q9UJ42 338 aa8.4□□□□□ -1.06
SF3A1-207ENST00000471342 LRBAP50851 2863 aa8.4□□□□□ -1.07
SF3A1-207ENST00000471342 TRAV1-2A0A0B4J238 106 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 PQLC2LA1A4F0 135 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 HS3ST1O14792 307 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 IGHV1-46P01743 117 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 RAF1P04049 648 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 HLA-DPB1P04440 258 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 ALDOBP05062 364 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 APOBEC3AP31941 199 aaPredicted RBP8.39□□□□□ -1.07
SF3A1-207ENST00000471342 TMBIM6P55061 237 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 CAV3P56539 151 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 ZP1P60852 638 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 VBP1P61758 197 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 QRFPP83859 136 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 GFOD2Q3B7J2 385 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 RGS7BPQ6MZT1 257 aaPredicted RBP8.39□□□□□ -1.07
SF3A1-207ENST00000471342 VHLLQ6RSH7 139 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 SLC22A25Q6T423 547 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 ASCL4Q6XD76 172 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 GDPGP1Q6ZNW5 385 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 PGAP1Q75T13 922 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 C1orf174Q8IYL3 243 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF611Q8N823 705 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 SEMA6DQ8NFY4 1073 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 OR52N4Q8NGI2 321 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 NDNFQ8TB73 568 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 SYNPRQ8TBG9 265 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 DYNC2LI1Q8TCX1 351 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 OR5P3Q8WZ94 311 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 NRGNQ92686 78 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 ITFG2Q969R8 447 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 C12orf43Q96C57 262 aaKnown RBP8.39□□□□□ -1.07
SF3A1-207ENST00000471342 ISOC1Q96CN7 298 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 CHCHD6Q9BRQ6 235 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 TRAF4Q9BUZ4 470 aaPredicted RBP8.39□□□□□ -1.07
SF3A1-207ENST00000471342 TLNRD1Q9H1K6 362 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 MSL2Q9HCI7 577 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 DCAF16Q9NXF7 216 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 MRPL15Q9P015 296 aaKnown RBP8.39□□□□□ -1.07
SF3A1-207ENST00000471342 EIF3KQ9UBQ5 218 aaKnown RBP8.39□□□□□ -1.07
SF3A1-207ENST00000471342 PIGLQ9Y2B2 252 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 ATP23Q9Y6H3 246 aa8.39□□□□□ -1.07
SF3A1-207ENST00000471342 PDZD2O15018 2839 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF850A8MQ14 1090 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms