RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RPRD1BQ9NQG5 326 aaKnown RBP11.4□□□□□ -0.58
HMGN1-211ENST00000471260 CYB5R1Q9UHQ9 305 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 PPP1R3CQ9UQK1 317 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 LSM2Q9Y333 95 aaKnown RBP11.4□□□□□ -0.58
HMGN1-211ENST00000471260 OR6C68A6NDL8 312 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 IQCF6A8MYZ5 107 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 BOLA2-SMG1P6H3BVE0 249 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 FOXH1O75593 365 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 GPANK1O95872 356 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 IGHV2-70P01814 119 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 DBHP09172 617 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 PSMD7P51665 324 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 MEP1BQ16820 701 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 SPANXN2Q5MJ10 180 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 DCAF12L2Q5VW00 463 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 OTPQ5XKR4 325 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 SLC18B1Q6NT16 456 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 LRRC28Q86X40 367 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-211ENST00000471260 LYSMD2Q8IV50 215 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 KLHL36Q8N4N3 616 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 OR52E2Q8NGJ4 325 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 UBE2FQ969M7 185 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 TMEM80Q96HE8 168 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 ZNF582Q96NG8 517 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-211ENST00000471260 WDFY2Q96P53 400 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 ATF6BQ99941 703 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 TMPRSS13Q9BYE2 586 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 NDUFB11Q9NX14 153 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 AASSQ9UDR5 926 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 PCDHB10Q9UN67 800 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 POLR3KQ9Y2Y1 108 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-211ENST00000471260 CDH10Q9Y6N8 788 aa11.39□□□□□ -0.59
HMGN1-211ENST00000471260 A0A1B0GWJ7 208 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 BHLHE40O14503 412 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 FSTL3O95633 263 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 GASTP01350 101 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 HLA-DQA2P01906 255 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 ZNF823P16415 610 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 SRP9P49458 86 aaKnown RBP11.38□□□□□ -0.59
HMGN1-211ENST00000471260 RSPO1Q2MKA7 263 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-211ENST00000471260 SPRNQ5BIV9 151 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 CORO6Q6QEF8 472 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 RASSF6Q6ZTQ3 369 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 C1QL2Q7Z5L3 287 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-211ENST00000471260 MUC20Q8N307 709 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-211ENST00000471260 SDR9C7Q8NEX9 313 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 OR2T4Q8NH00 348 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 NANPQ8TBE9 248 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 ZNF418Q8TF45 676 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-211ENST00000471260 ITLN1Q8WWA0 313 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 OR2V2Q96R30 315 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 DDOQ99489 341 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 SLC30A2Q9BRI3 323 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 HCAR1Q9BXC0 346 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 PATZ1Q9HBE1 687 aaKnown RBP11.38□□□□□ -0.59
HMGN1-211ENST00000471260 MRPS18AQ9NVS2 196 aaKnown RBP11.38□□□□□ -0.59
HMGN1-211ENST00000471260 PTTG3PQ9NZH4 202 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 STUB1Q9UNE7 303 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 DIMT1Q9UNQ2 313 aaKnown RBP11.38□□□□□ -0.59
HMGN1-211ENST00000471260 BAIAP2Q9UQB8 552 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 DYSFO75923 2080 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 WNK2Q9Y3S1 2297 aa11.38□□□□□ -0.59
HMGN1-211ENST00000471260 ZNF670-ZNF695F2Z2N8 137 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 TMEM178BH3BS89 294 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 MYL12BO14950 172 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 SBK2P0C263 348 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 ACSM4P0C7M7 580 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 DBTP11182 482 aaKnown RBP11.37□□□□□ -0.59
HMGN1-211ENST00000471260 TPTEP56180 551 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 BTG1P62324 171 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 IFITM3Q01628 133 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 ZNF91Q05481 1191 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 MALLQ13021 153 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 HLXQ14774 488 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-211ENST00000471260 KLHL22Q53GT1 634 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 SLC35F1Q5T1Q4 408 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 OR2T2Q6IF00 324 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 CFAP77Q6ZQR2 320 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 C1orf229Q6ZS94 237 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-211ENST00000471260 CCDC190Q86UF4 302 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 LINC00346Q8IVM7 164 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 SPTSSAQ969W0 71 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 OPALINQ96PE5 141 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 JMJD8Q96S16 334 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 C6orf62Q9GZU0 229 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-211ENST00000471260 EGLN3Q9H6Z9 239 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 GCM1Q9NP62 436 aa11.37□□□□□ -0.59
HMGN1-211ENST00000471260 LOC100506127A0A0U1RQW1 187 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 F5H5K5 113 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 AVPP01185 164 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 IL1AP01583 271 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 APOA1P02647 267 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 EPHA1P21709 976 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 PSMA1P25786 263 aaKnown RBP11.36□□□□□ -0.59
HMGN1-211ENST00000471260 MDH2P40926 338 aaKnown RBP11.36□□□□□ -0.59
HMGN1-211ENST00000471260 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
HMGN1-211ENST00000471260 SPHARQ15513 63 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 MED22Q15528 200 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 CLEC12AQ5QGZ9 265 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms