RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 Q6ZS46 218 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 CCDC121Q6ZUS5 278 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 TMPRSS11FQ6ZWK6 438 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 CROCCP2Q86T23 111 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 ADCK1Q86TW2 530 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 MKXQ8IYA7 352 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 RNF113BQ8IZP6 322 aaKnown RBP7.39□□□□□ -1.23
CCDC171-204ENST00000470191 OR6V1Q8N148 313 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 OR1M1Q8NGA1 313 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 OR4K13Q8NH42 304 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 AJUBAQ96IF1 538 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 RSRC1Q96IZ7 334 aaKnown RBP7.39□□□□□ -1.23
CCDC171-204ENST00000470191 MAP6Q96JE9 813 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 GAFA1Q96PS6 74 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 OCSTAMPQ9BR26 566 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 CDCA4Q9BXL8 241 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 PNRC2Q9NPJ4 139 aaKnown RBP7.39□□□□□ -1.23
CCDC171-204ENST00000470191 NRIP3Q9NQ35 241 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 HAO2Q9NYQ3 351 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 MRPL15Q9P015 296 aaKnown RBP7.39□□□□□ -1.23
CCDC171-204ENST00000470191 SIGLEC7Q9Y286 467 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 TENM3Q9P273 2699 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 TVP23AA6NH52 213 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 M0R1W7 72 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 AKR7A2O43488 359 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 PTP4A3O75365 173 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 PYCR1P32322 319 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 CAPZA1P52907 286 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 LGALS4P56470 323 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 FXYD6P3P58550 94 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 ERVFRD-1P60508 538 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 SLC35A2P78381 396 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 TAF13Q15543 124 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 GFOD2Q3B7J2 385 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 KHDC1LQ5JSQ8 128 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 STUMQ69YW2 141 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 ERICH5Q6P6B1 374 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 FKBP9P1Q75LS8 142 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 LHFPL4Q7Z7J7 247 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 SDR9C7Q8NEX9 313 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 TMEM185AQ8NFB2 350 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 C8orf46Q8TAG6 207 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 PIFOQ8TCI5 191 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 RPL3LQ92901 407 aaKnown RBP7.38□□□□□ -1.23
CCDC171-204ENST00000470191 SH3GL1Q99961 368 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 B9D2Q9BPU9 175 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 PRSS22Q9GZN4 317 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 MEGF9Q9H1U4 602 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 RNPEPL1Q9HAU8 725 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 CENPMQ9NSP4 180 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 GAR1Q9NY12 217 aaKnown RBP7.38□□□□□ -1.23
CCDC171-204ENST00000470191 CYB5R1Q9UHQ9 305 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 TMEM5Q9Y2B1 443 aa7.38□□□□□ -1.23
CCDC171-204ENST00000470191 UNC119BA6NIH7 251 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 E9PQ18 207 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 MRASO14807 208 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 CCDC159P0C7I6 412 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 PSKH1P11801 424 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 HIST1H1CP16403 213 aaKnown RBP7.37□□□□□ -1.23
CCDC171-204ENST00000470191 ZNF823P16415 610 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 FAHP16930 419 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 GNALP38405 381 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 VDAC2P45880 294 aaPredicted RBP7.37□□□□□ -1.23
CCDC171-204ENST00000470191 SLC7A2P52569 658 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 CNN3Q15417 329 aaKnown RBP7.37□□□□□ -1.23
CCDC171-204ENST00000470191 SLC35F1Q5T1Q4 408 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 LYPD4Q6UWN0 246 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 DPY19L2P2Q6ZN68 376 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 KCTD8Q6ZWB6 473 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 CPLX4Q7Z7G2 160 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 DYNAPQ8N1N2 210 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 LINC00471Q8N535 108 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 ZNRF1Q8ND25 227 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 FAM156AQ8NDB6 213 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 WFDC9Q8NEX5 89 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 OR2T12Q8NG77 320 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 OR5AU1Q8NGC0 362 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 OR5D13Q8NGL4 314 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 DYDC1Q8WWB3 177 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 TLCD1Q96CP7 247 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 MED30Q96HR3 178 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 COPS4Q9BT78 406 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 MUC13Q9H3R2 512 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 ABCB10Q9NRK6 738 aa7.37□□□□□ -1.23
CCDC171-204ENST00000470191 MRPL22Q9NWU5 206 aaKnown RBP7.37□□□□□ -1.23
CCDC171-204ENST00000470191 TCRBV4S1A1TA0A5B7 111 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 OR6C68A6NDL8 312 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 FAM220BPB1ANY3 271 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 FXYD1O00168 92 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 TXNDC12O95881 172 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 ANXA2P07355 339 aaKnown RBP7.36□□□□□ -1.23
CCDC171-204ENST00000470191 CHRM2P08172 466 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 JUNBP17275 347 aaPredicted RBP7.36□□□□□ -1.23
CCDC171-204ENST00000470191 NOS3P29474 1203 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 BLCAPP62952 87 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 SF3A3Q12874 501 aaKnown RBP eCLIP7.36□□□□□ -1.23
CCDC171-204ENST00000470191 TIGD6Q17RP2 521 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 IFI44LQ53G44 452 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 DMRTC1Q5HYR2 192 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 SMARCD3Q6STE5 483 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms