RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 NINJ1Q92982 152 aa12.95□□□□□ -0.34
NPHP4-205ENST00000466897 CXorf56Q9H5V9 222 aa12.95□□□□□ -0.34
NPHP4-205ENST00000466897 DYNLRB1Q9NP97 96 aa12.95□□□□□ -0.34
NPHP4-205ENST00000466897 ZNF275Q9NSD4 429 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-205ENST00000466897 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
NPHP4-205ENST00000466897 ENPP5Q9UJA9 477 aa12.95□□□□□ -0.34
NPHP4-205ENST00000466897 MPC1Q9Y5U8 109 aa12.95□□□□□ -0.34
NPHP4-205ENST00000466897 TACC2O95359 2948 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 TRBV5-5A0A0J9YX44 114 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 ZSCAN5BA6NJL1 495 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 LILRA1O75019 489 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 HSMCR30P0CW71 290 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 ALDH3B1P43353 468 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 PRSS12P56730 875 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 RPS11P62280 158 aaKnown RBP eCLIP12.94□□□□□ -0.34
NPHP4-205ENST00000466897 ARMCX4Q5H9R4 360 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 OR5AS1Q8N127 324 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 PARP16Q8N5Y8 322 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 SPERTQ8NA61 448 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 BHLHE23Q8NDY6 225 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 OR51A4Q8NGJ6 313 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 OR10AC1Q8NH08 325 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 UBASH3BQ8TF42 649 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 MUL1Q969V5 352 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 MBD6Q96DN6 1003 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 LURAP1Q96LR2 239 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 TECTBQ96PL2 329 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 CACNG6Q9BXT2 260 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 MRPS26Q9BYN8 205 aaKnown RBP12.94□□□□□ -0.34
NPHP4-205ENST00000466897 PLEKHA1Q9HB21 404 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 ZNF701Q9NV72 531 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-205ENST00000466897 NDUFB11Q9NX14 153 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 PIGLQ9Y2B2 252 aa12.94□□□□□ -0.34
NPHP4-205ENST00000466897 SC5DO75845 299 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 INMTO95050 263 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 IGHV1-46P01743 117 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 ERCC1P07992 297 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-205ENST00000466897 FAHP16930 419 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 GABRA5P31644 462 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 Q499Y3 187 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 CLVS2Q5SYC1 327 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 LIPKQ5VXJ0 399 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 CELF2-AS1Q8N7Q2 184 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 OR13C3Q8NGS6 347 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 PAPOLGQ9BWT3 736 aaKnown RBP12.93□□□□□ -0.34
NPHP4-205ENST00000466897 CHST5Q9GZS9 411 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 LIME1Q9H400 295 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 MSL2Q9HCI7 577 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 DHDHQ9UQ10 334 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 SF3B6Q9Y3B4 125 aaKnown RBP12.93□□□□□ -0.34
NPHP4-205ENST00000466897 RHBDD3Q9Y3P4 386 aa12.93□□□□□ -0.34
NPHP4-205ENST00000466897 ANKRD17O75179 2603 aaKnown RBP12.92□□□□□ -0.34
NPHP4-205ENST00000466897 PNMA8CA0A1B0GUJ8 204 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 CCRL2O00421 344 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 MLNRO43193 412 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 ALX3O95076 343 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 PTBP3O95758 552 aaKnown RBP12.92□□□□□ -0.34
NPHP4-205ENST00000466897 SERPINA3P01011 423 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 CD2P06729 351 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 OCM2P0CE71 109 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 NAT2P11245 290 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 GALP22466 123 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 TNFSF4P23510 183 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 MAPK3P27361 379 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-205ENST00000466897 PSMB9P28065 219 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 GNALP38405 381 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 MZT1Q08AG7 82 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 NEDD8Q15843 81 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 SSX1Q16384 188 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 TSTQ16762 297 aaKnown RBP12.92□□□□□ -0.34
NPHP4-205ENST00000466897 UTS2BQ765I0 119 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 TSEN15Q8WW01 171 aaKnown RBP12.92□□□□□ -0.34
NPHP4-205ENST00000466897 NEU4Q8WWR8 484 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-205ENST00000466897 PHYHIPQ92561 330 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 ADAT1Q9BUB4 502 aaKnown RBP12.92□□□□□ -0.34
NPHP4-205ENST00000466897 RAB1BQ9H0U4 201 aa12.92□□□□□ -0.34
NPHP4-205ENST00000466897 BEX4Q9NWD9 120 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-205ENST00000466897 AKAP6Q13023 2319 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 ABCA12Q86UK0 2595 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-205ENST00000466897 ANKRD61A6NGH8 418 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 ANXA2P2A6NMY6 339 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 GATBO75879 557 aaKnown RBP12.91□□□□□ -0.34
NPHP4-205ENST00000466897 NRASP01111 189 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 ZNF20P17024 532 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 CA6P23280 308 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 DNASE1P24855 282 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 CD200P41217 278 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 GP2P55259 537 aaKnown RBP12.91□□□□□ -0.34
NPHP4-205ENST00000466897 MRPS11P82912 194 aaKnown RBP12.91□□□□□ -0.34
NPHP4-205ENST00000466897 PRDX4Q13162 271 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 TESK1Q15569 626 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 OR8G1Q15617 311 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 CEACAM21Q3KPI0 293 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 ZNF529Q6P280 563 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 CD200R1LQ6Q8B3 271 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 UNQ9370/PRO34162Q6UXP9 181 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 SERPINA12Q8IW75 414 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 ZDHHC23Q8IYP9 409 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 OR2Z1Q8NG97 314 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms