RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 PCK2Q16822 640 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 ZNF841Q6ZN19 808 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 BTN2A1Q7KYR7 527 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 TIGD4Q8IY51 512 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 CMTM4Q8IZR5 234 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 OR4F5Q8NH21 305 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 TBC1D15Q8TC07 691 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 RNF133Q8WVZ7 376 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 SGK3Q96BR1 496 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 FAM71F1Q96KD3 344 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-206ENST00000466591 RNPEPL1Q9HAU8 725 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 FAM96BQ9Y3D0 163 aa14.55□□□□□ -0.08
COL7A1-206ENST00000466591 NDUFB3O43676 98 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 KNG1P01042 644 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 MUC1P15941 1255 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-206ENST00000466591 MS4A2Q01362 244 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 GINS1Q14691 196 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 FIP1L1Q6UN15 594 aaKnown RBP14.54□□□□□ -0.08
COL7A1-206ENST00000466591 KRT77Q7Z794 578 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 SPATA24Q86W54 205 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 FAM90A1Q86YD7 464 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 GCSAMQ8N6F7 178 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 ZNF454Q8N9F8 522 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 OR1M1Q8NGA1 313 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 H1FXQ92522 213 aaKnown RBP14.54□□□□□ -0.08
COL7A1-206ENST00000466591 SPSB4Q96A44 273 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 CCL13Q99616 98 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 BEX1Q9HBH7 125 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 SMURF1Q9HCE7 757 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 ABCB9Q9NP78 766 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 ACOXLQ9NUZ1 547 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 LAMP5Q9UJQ1 280 aa14.54□□□□□ -0.08
COL7A1-206ENST00000466591 ARRDC5A6NEK1 342 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 FAM181BA6NEQ2 426 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 FAM107AO95990 144 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 HOXB6P17509 224 aaKnown RBP14.53□□□□□ -0.08
COL7A1-206ENST00000466591 MDKP21741 143 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-206ENST00000466591 CSNK2BP67870 215 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 IKZF1Q13422 519 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 LRRC10Q5BKY1 277 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 CD300LDQ6UXZ3 194 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 PDZD9Q8IXQ8 264 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 PIGCQ92535 297 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 DACT3Q96B18 629 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-206ENST00000466591 CLPTM1LQ96KA5 538 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 CAB39Q9Y376 341 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-206ENST00000466591 RHBDD3Q9Y3P4 386 aa14.53□□□□□ -0.08
COL7A1-206ENST00000466591 IGHV1-69DA0A0B4J2H0 117 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 A0A1B0GUS0 222 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 hCG_38984A0A1B0GV85 526 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 BTBD17A6NE02 478 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 ZNF850A8MQ14 1090 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 CDIPTO14735 213 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 SELENOFO60613 162 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 IGHV1-69P01742 117 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 ANOS1P23352 680 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 OPRL1P41146 370 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 RAG2P55895 527 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 PRDX4Q13162 271 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 LINC01590Q5TEZ4 76 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 TEX36Q5VZQ5 186 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 RHOUQ7L0Q8 258 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 PAPD5Q8NDF8 572 aaKnown RBP14.52□□□□□ -0.09
COL7A1-206ENST00000466591 OTOSQ8NHW6 89 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 SSMEM1Q8WWF3 244 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 TAF15Q92804 592 aaKnown RBP eCLIP14.52□□□□□ -0.09
COL7A1-206ENST00000466591 CNTD2Q9H8S5 307 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 MPC1Q9Y5U8 109 aa14.52□□□□□ -0.09
COL7A1-206ENST00000466591 DOCK11Q5JSL3 2073 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 CENPVL3A0A0U1RRI6 287 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 A0A1B0GVI7 797 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 TMEM210A6NLX4 147 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 AQP12BA6NM10 295 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 GYG2O15488 501 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 PRODHO43272 600 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 OSMP13725 252 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 EEF1B2P24534 225 aaKnown RBP14.51□□□□□ -0.09
COL7A1-206ENST00000466591 FLOT2Q14254 428 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 C11orf91Q3C1V1 193 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 CDONQ4KMG0 1287 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 WDR38Q5JTN6 314 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 PRR31Q5SQ13 230 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 WDR82Q6UXN9 313 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 Q6YL49 198 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 THAP5Q7Z6K1 395 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 AQP12AQ8IXF9 295 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 ZDHHC23Q8IYP9 409 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 RNF170Q96K19 258 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 TBX15Q96SF7 602 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 ZNF696Q9H7X3 374 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 NIPAL2Q9H841 368 aa14.51□□□□□ -0.09
COL7A1-206ENST00000466591 RPUSD1Q9UJJ7 312 aaKnown RBP14.51□□□□□ -0.09
COL7A1-206ENST00000466591 A0A1W2PQ09 198 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 TNFRSF13BO14836 293 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-206ENST00000466591 GSC2O15499 205 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 PAHP00439 452 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 LHBP01229 141 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 MELTFP08582 738 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 ANXA8P13928 327 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 TUSC1Q2TAM9 212 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms