RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MT-ND4P03905 459 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 STAG3L2P0CL84 134 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 ME2P23368 584 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 IVDP26440 423 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 APLNRP35414 380 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 GGT2P36268 569 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 ARL2P36404 184 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 KIR3DL2P43630 455 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 ERFP50548 548 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 ETV1P50549 477 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 ZNF816Q0VGE8 651 aaPredicted RBP2.56□□□□□ -2
CDC42BPA-211ENST00000466538 PIGHQ14442 188 aaPredicted RBP2.56□□□□□ -2
CDC42BPA-211ENST00000466538 MFSD14CQ5VZR4 134 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 OR2T5Q6IEZ7 315 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 TTLQ8NG68 377 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 OR51L1Q8NGJ5 315 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 OR2T29Q8NH02 315 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 ESR2Q92731 530 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 RBMXL1Q96E39 390 aaKnown RBP2.56□□□□□ -2
CDC42BPA-211ENST00000466538 LINC00477Q96M19 166 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 RDH12Q96NR8 316 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 SFXN3Q9BWM7 321 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 GAL3ST2Q9H3Q3 398 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 WFDC1Q9HC57 220 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 LZTFL1Q9NQ48 299 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 SIRT7Q9NRC8 400 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 OR51B2Q9Y5P1 312 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 IGKV1-27A0A075B6S5 117 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 C7orf66A4D0T2 115 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 C5orf63A6NC05 138 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 MANBAO00462 879 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 MYL12BO14950 172 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 PSPHP1O15172 72 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 RTL8CO15255 209 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 PLIN3O60664 434 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 RCBTB2O95199 551 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 ETHE1O95571 254 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 THRAP10827 490 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 CCNG1P51959 295 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 C2orf54Q08AI8 447 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 CDC20Q12834 499 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 TEX30Q5JUR7 227 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 ZNF880Q6PDB4 577 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 OPN5Q6U736 354 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 ERO1BQ86YB8 467 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 PDCL2Q8N4E4 241 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 OR1S1Q8NH92 325 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 CIRBP-AS1Q8TBR5 109 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 DCAKDQ8WVC6 231 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 SMARCD1Q96GM5 515 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 KCNS3Q9BQ31 491 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 TMEM175Q9BSA9 504 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 CHCHD7Q9BUK0 85 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 OSBPL11Q9BXB4 747 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 CFAP45Q9UL16 551 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 FLVCR2Q9UPI3 526 aa2.55□□□□□ -2
CDC42BPA-211ENST00000466538 JCADQ9P266 1359 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 IGLV3-12A0A075B6K2 115 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 A0A0A6YYD5 115 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 LOC100653049A0A140TA62 436 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 GSTTP1A0A1W2PQM5 241 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 ZNF850A8MQ14 1090 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 RRP8O43159 456 aaKnown RBP2.54□□□□□ -2
CDC42BPA-211ENST00000466538 GATBO75879 557 aaKnown RBP2.54□□□□□ -2
CDC42BPA-211ENST00000466538 KRT34O76011 436 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 TTC4O95801 387 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 TGM6O95932 706 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 TRBV12-3P01733 135 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 PMELP40967 661 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 UBE2E1P51965 193 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 HADHBP55084 474 aaKnown RBP2.54□□□□□ -2
CDC42BPA-211ENST00000466538 TAS2R60P59551 318 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 ST3GAL4Q11206 333 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 OR1Q1Q15612 314 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 FAM222AQ5U5X8 452 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 AADACL4Q5VUY2 407 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 STEAP4Q687X5 459 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 ARHGAP18Q8N392 663 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 WDR31Q8NA23 367 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 OR1L1Q8NH94 360 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 ENKURQ8TC29 256 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 DEDD2Q8WXF8 326 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 BAALCQ8WXS3 180 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 OR8D1Q8WZ84 308 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 NEURL3Q96EH8 262 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 FAM19A4Q96LR4 140 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 UBE2E2Q96LR5 201 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 OR4K3Q96R72 315 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 FBXO8Q9NRD0 319 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 ZMAT5Q9UDW3 170 aaKnown RBP2.54□□□□□ -2
CDC42BPA-211ENST00000466538 SIGLEC9Q9Y336 463 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 CBY1Q9Y3M2 126 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 SIGLEC1Q9BZZ2 1709 aa2.54□□□□□ -2
CDC42BPA-211ENST00000466538 DFFAO00273 331 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 GATCO43716 136 aaKnown RBP2.53□□□□□ -2
CDC42BPA-211ENST00000466538 SPOPO43791 374 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 RBBP9O75884 186 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 IGLV3-25P01717 112 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 HLA-DQB1P01920 261 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 IL4P05112 153 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms