RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 FAM96BQ9Y3D0 163 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 U3KQK5 164 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 IRGMA1A4Y4 181 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 IMPA2O14732 288 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 ARPC3O15145 178 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 ICMTO60725 284 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 MRPS14O60783 128 aaKnown RBP12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 WBP4O75554 376 aaKnown RBP12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 SERPINI2O75830 405 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 TSPAN19P0C672 248 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 FMO3P31513 532 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 RPL18Q07020 188 aaKnown RBP12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 PSG7Q13046 419 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 METTL11BQ5VVY1 283 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 Q6ZR03 302 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 C1orf122Q6ZSJ8 110 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 GID4Q8IVV7 300 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 APH1BQ8WW43 257 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 ERMAPQ96PL5 475 aaPredicted RBP12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 IL4I1Q96RQ9 567 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 PPA2Q9H2U2 334 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 VCX3AQ9NNX9 186 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 NRIP3Q9NQ35 241 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 PLCXD1Q9NUJ7 323 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 LYSTQ99698 3801 aa12.12□□□□□ -0.47
HMGXB4-206ENST00000466438 LOC100509620A0A075B734 347 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 EFCAB10A6NFE3 127 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 MCIDASD6RGH6 385 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 M0R129 80 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 PRKYO43930 277 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 CD14P08571 375 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 FBP1P09467 338 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 ADORA3P0DMS8 318 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 CD33P20138 364 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 AQP2P41181 271 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 GDI2P50395 445 aaKnown RBP12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 FHL1Q13642 323 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 CASC10Q5T4H9 136 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 GPR139Q6DWJ6 353 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 ZNF841Q6ZN19 808 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 WFDC9Q8NEX5 89 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 MYDGFQ969H8 173 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 SIRPDQ9H106 197 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 INIPQ9NRY2 104 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 CNOT2Q9NZN8 540 aaKnown RBP12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 H2AFY2Q9P0M6 372 aaPredicted RBP12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 RPL36Q9Y3U8 105 aaKnown RBP12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 SNX5Q9Y5X3 404 aa12.11□□□□□ -0.47
HMGXB4-206ENST00000466438 LCE6AA0A183 80 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 A0A1W2PRG6 482 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 PRR23D1E9PI22 279 aaPredicted RBP12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 PLPP3O14495 311 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 PRODHO43272 600 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 RNF13O43567 381 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 CYB5R3P00387 301 aaPredicted RBP12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 F13BP05160 661 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 NHLRC4P0CG21 123 aaPredicted RBP12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 PRR23D2P0DMB1 279 aaPredicted RBP12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 SDHAP31040 664 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 KIR2DS4P43632 304 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 CTXN1P60606 82 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 BLMHQ13867 455 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 ARMC4Q5T2S8 1044 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 NXNL2Q5VZ03 156 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 CD276Q5ZPR3 534 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 ZNF773Q6PK81 442 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 DCDC5Q6ZRR9 648 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 HDDC2Q7Z4H3 204 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 NDUFA11Q86Y39 141 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 LRRC18Q8N456 261 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 MOSPD2Q8NHP6 518 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 ZNF420Q8TAQ5 688 aaPredicted RBP12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 BATF3Q9NR55 127 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 DNAJC27Q9NZQ0 273 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 GRHPRQ9UBQ7 328 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 CAB39Q9Y376 341 aaPredicted RBP12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 IER3IP1Q9Y5U9 82 aa12.1□□□□□ -0.47
HMGXB4-206ENST00000466438 STAB2Q8WWQ8 2551 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 NPIPB13A6NJU9 1138 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 NPIPB4C9JG80 1138 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 XKRYO14609 159 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 RGS10O43665 173 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 ENTPD6O75354 484 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 FBXO24O75426 580 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 TXNDC12O95881 172 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 QDPRP09417 244 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 PIPP12273 146 aaPredicted RBP12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 NPY4RP50391 375 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 DAP3P51398 398 aaKnown RBP12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 KRTAP10-11P60412 298 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 EFNB1P98172 346 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 APOFQ13790 326 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 LAIR2Q6ISS4 152 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 LYPD2Q6UXB3 125 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 ADCK1Q86TW2 530 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 IGFN1Q86VF2 1251 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms