RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 APH1AQ96BI3 265 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 SPENQ96T58 3664 aaKnown RBP11.81□□□□□ -0.52
UBE4B-206ENST00000466379 LINC00470Q9BZP3 86 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 LPAR5Q9H1C0 372 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 BCO1Q9HAY6 547 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 MOV10Q9HCE1 1003 aaKnown RBP11.81□□□□□ -0.52
UBE4B-206ENST00000466379 PARPBPQ9NWS1 579 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 DLL3Q9NYJ7 618 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 TAS2R8Q9NYW2 309 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 URB1O60287 2271 aaKnown RBP11.81□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF587BE7ETH6 402 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 SSNA1O43805 119 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 CDC14BO60729 498 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 MTRF1O75570 445 aaKnown RBP11.81□□□□□ -0.52
UBE4B-206ENST00000466379 HLA-HP01893 362 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 FAUP35544 74 aaKnown RBP11.81□□□□□ -0.52
UBE4B-206ENST00000466379 NBL1P41271 181 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 CAPZA1P52907 286 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 RAG2P55895 527 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 PCBD1P61457 104 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 KRTAP27-1Q3LI81 207 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 FJX1Q86VR8 437 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 SEMA6DQ8NFY4 1073 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 OR4S1Q8NGB4 309 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 OR10K1Q8NGX5 313 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 GINS4Q9BRT9 223 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 LRFN3Q9BTN0 628 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 SELENOIQ9C0D9 397 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 ACTR6Q9GZN1 396 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 CHST5Q9GZS9 411 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 UPB1Q9UBR1 384 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 PRSS50Q9UI38 385 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 ING4Q9UNL4 249 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 MYO7BQ6PIF6 2116 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 A0A0A6YYH2 397 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 A6NJ64 397 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF724A8MTY0 619 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 PYCARD-AS1I3L0S3 204 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 SULT1C2O00338 296 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 CRTAPO75718 401 aaPredicted RBP11.8□□□□□ -0.52
UBE4B-206ENST00000466379 FCGR2AP12318 317 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 CCL2P13500 99 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 PRF1P14222 555 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 ACTBP60709 375 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 ACTG1P63261 375 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 CLN3Q13286 438 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 MAB21L1Q13394 359 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 TNK1Q13470 666 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 TRAPPC6BQ86SZ2 158 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF100Q8IYN0 542 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 GVQW1Q8N7I0 195 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 TINAGL1Q9GZM7 467 aaPredicted RBP11.8□□□□□ -0.52
UBE4B-206ENST00000466379 ZDHHC11Q9H8X9 412 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 B3GNT2Q9NY97 397 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 PAIP2BQ9ULR5 123 aaKnown RBP11.8□□□□□ -0.52
UBE4B-206ENST00000466379 RIF1Q5UIP0 2472 aaKnown RBP11.8□□□□□ -0.52
UBE4B-206ENST00000466379 SOCS1O15524 211 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 ICMTO60725 284 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 CSN2P05814 226 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 CEACAM1P13688 526 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 CCNOP22674 350 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 SF3B4Q15427 424 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE4B-206ENST00000466379 RAB12Q6IQ22 244 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 Q6ZSR3 168 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 OR10R2Q8NGX6 335 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 PP6455Q8WZ26 134 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 SCPEP1Q9HB40 452 aa11.8□□□□□ -0.52
UBE4B-206ENST00000466379 TM4SF5O14894 197 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 RAB3DO95716 219 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 EDN3P14138 238 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 RCVRNP35243 200 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 PTGFRP43088 359 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 TAS2R19P59542 299 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF92Q03936 586 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 RNPS1Q15287 305 aaKnown RBP11.79□□□□□ -0.52
UBE4B-206ENST00000466379 CD276Q5ZPR3 534 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 OR52B4Q8NGK2 314 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 TNFAIP8L1Q8WVP5 186 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 TMEM59Q9BXS4 323 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 FBLN5Q9UBX5 448 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 ARHGAP21Q5T5U3 1957 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 MUC6Q6W4X9 2439 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 RPL36A-HNRNPH2H7BZ11 118 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 VSIG10L2P0DP72 767 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF24P17028 368 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 PLAC9Q5JTB6 97 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 OR52W1Q6IF63 320 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 OR2W3Q7Z3T1 314 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 CDH26Q8IXH8 852 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 PNLDC1Q8NA58 520 aaKnown RBP11.79□□□□□ -0.52
UBE4B-206ENST00000466379 TMEM229BQ8NBD8 167 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 KCNG3Q8TAE7 436 aa11.79□□□□□ -0.52
UBE4B-206ENST00000466379 ELL3Q9HB65 397 aaPredicted RBP11.79□□□□□ -0.52
UBE4B-206ENST00000466379 LOC100509620A0A075B734 347 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 A0A1B0GUH1 482 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 FAM230AA0A1W2PPH8 454 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 SLC22A20A6NK97 555 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 FABP7O15540 132 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 SSX5O60225 188 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 CYB5AP00167 134 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms