RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 DHRS3O75911 302 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 NDUFB6O95139 128 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 MMP7P09237 267 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-205ENST00000466192 AKAIN1P0CW23 69 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 ANXA7P20073 488 aaKnown RBP15.94■□□□□ 0.14
COL9A3-205ENST00000466192 RAD52P43351 418 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 FOXG1P55316 489 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-205ENST00000466192 ACTBP60709 375 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 ACTG1P63261 375 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 ARF1P84077 181 aaKnown RBP15.94■□□□□ 0.14
COL9A3-205ENST00000466192 RNPS1Q15287 305 aaKnown RBP15.94■□□□□ 0.14
COL9A3-205ENST00000466192 KRTAP27-1Q3LI81 207 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 C9orf135Q5VTT2 229 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 DRAM2Q6UX65 266 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 FGD2Q7Z6J4 655 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 DEDD2Q8WXF8 326 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 IGKV1-9A0A0C4DH69 117 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 RPL36A-HNRNPH2H7BZ11 118 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 RAB27BO00194 218 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 SULT1C2O00338 296 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 TGM6O95932 706 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 OR3A4PP47883 348 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 HTR5AP47898 357 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 PCBD1P61457 104 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 NRN1LQ496H8 165 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 Q6ZSR3 168 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 NUFIP2Q7Z417 695 aaKnown RBP15.93■□□□□ 0.14
COL9A3-205ENST00000466192 LIX1LQ8IVB5 337 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 OR51S1Q8NGJ8 323 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 SGK3Q96BR1 496 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 KCNMB2Q9Y691 235 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 A0A1B0GUH1 482 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 WIPF3A6NGB9 483 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 EFSO43281 561 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 PRAF2O60831 178 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 P2RX3P56373 397 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 SSBP1Q04837 148 aaKnown RBP15.93■□□□□ 0.14
COL9A3-205ENST00000466192 STEAP1BQ6NZ63 245 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 GLIPR1L1Q6UWM5 242 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 Q6ZTK2 550 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 RFPL4BQ6ZWI9 263 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 CHST4Q8NCG5 386 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 OR52H1Q8NGJ2 320 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 NPRL2Q8WTW4 380 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 APH1AQ96BI3 265 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 GPER1Q99527 375 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 SEC22CQ9BRL7 303 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 GINS4Q9BRT9 223 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 OR10A2Q9H208 303 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 ZNF224Q9NZL3 707 aa15.93■□□□□ 0.14
COL9A3-205ENST00000466192 MRPS28Q9Y2Q9 187 aaKnown RBP15.93■□□□□ 0.14
COL9A3-205ENST00000466192 DCHS1Q96JQ0 3298 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 ZNF587BE7ETH6 402 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 PYCARD-AS1I3L0S3 204 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 FARS2O95363 451 aaKnown RBP15.92■□□□□ 0.14
COL9A3-205ENST00000466192 CRYZL1O95825 349 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 ANXA3P12429 323 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 FAHP16930 419 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 RBMS2Q15434 407 aaKnown RBP15.92■□□□□ 0.14
COL9A3-205ENST00000466192 Q5BKY6 102 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 METTL11BQ5VVY1 283 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 RAB12Q6IQ22 244 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 CDH24Q86UP0 819 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 MCEMP1Q8IX19 187 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 GABRG1Q8N1C3 465 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 OR2AE1Q8NHA4 323 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 SSC4DQ8WTU2 575 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 SCPEP1Q9HB40 452 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 OR6C65A6NJZ3 312 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 CEACAM4O75871 244 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 SULT1A3P0DMM9 295 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 SULT1A4P0DMN0 295 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 TMEM104Q8NE00 496 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 SUN5Q8TC36 379 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 PIGLQ9Y2B2 252 aa15.92■□□□□ 0.14
COL9A3-205ENST00000466192 A0A096LPE4 126 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 A0A1W2PPZ6 126 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 TMEM14DPA8MWL7 114 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 PROB1E7EW31 1015 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 WISP2O76076 250 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 CYB5AP00167 134 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 THBS4P35443 961 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 TAS2R19P59542 299 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 ZNF260Q3ZCT1 412 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 PABPC1L2AQ5JQF8 200 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 GLDNQ6ZMI3 551 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-205ENST00000466192 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-205ENST00000466192 AQP3Q92482 292 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 NICN1Q9BSH3 213 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 TRAF4Q9BUZ4 470 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-205ENST00000466192 KLK13Q9UKR3 277 aa15.91■□□□□ 0.14
COL9A3-205ENST00000466192 TRAV17A0A0B4J275 112 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 M0QYG6 137 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 IGHG3P01860 377 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 LCATP04180 440 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 ZP1P60852 638 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 TNK1Q13470 666 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 UBE2V2Q15819 145 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 STK11Q15831 433 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 CDNFQ49AH0 187 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms