RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 ZNF101Q8IZC7 436 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 TMEM256Q8N2U0 113 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 CSGALNACT2Q8N6G5 542 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 INO80EQ8NBZ0 244 aaPredicted RBP1.91□□□□□ -2.1
SMC4-205ENST00000465563 PROKR2Q8NFJ6 384 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 TOP1MTQ969P6 601 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 UBE2E2Q96LR5 201 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 RNF157Q96PX1 679 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 RBFOX1Q9NWB1 397 aaKnown RBP1.91□□□□□ -2.1
SMC4-205ENST00000465563 MROH7Q68CQ1 1323 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 SHROOM3Q8TF72 1996 aa1.9□□□□□ -2.1
SMC4-205ENST00000465563 A0A0A6YYD5 115 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 A0A0B4J2E0 115 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 CCL15-CCL14A0A0B4J2E2 113 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 CENPVL3A0A0U1RRI6 287 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 NDUFC2-KCTD14E9PQ53 114 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 TRBV12-3P01733 135 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 CATP04040 527 aaKnown RBP1.9□□□□□ -2.11
SMC4-205ENST00000465563 THRAP10827 490 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 GZMAP12544 262 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 TCP1P17987 556 aaKnown RBP1.9□□□□□ -2.11
SMC4-205ENST00000465563 SRMP19623 302 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 MYL9P24844 172 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 CFHR2P36980 270 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 OR1G1P47890 313 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 RAB7AP51149 207 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 CCL15Q16663 113 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 FAM222AQ5U5X8 452 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 AP1ARQ63HQ0 302 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 KDM4DQ6B0I6 523 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 GUSBP11Q6P575 273 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 UNC93AQ86WB7 457 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 KIF2BQ8N4N8 673 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 ZNF645Q8N7E2 425 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 SLC35G3Q8N808 338 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 ST20-AS1Q8NBB2 130 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 OR1J4Q8NGS1 313 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 CA5BP1Q8WTZ4 195 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 APH1AQ96BI3 265 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 OR4K3Q96R72 315 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 CHCHD7Q9BUK0 85 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 NAA50Q9GZZ1 169 aaKnown RBP1.9□□□□□ -2.11
SMC4-205ENST00000465563 CYP3A43Q9HB55 503 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 MCUBQ9NWR8 336 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 CACNA1DQ01668 2161 aa1.9□□□□□ -2.11
SMC4-205ENST00000465563 NEURL4Q96JN8 1562 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 LINC01619G3V211 115 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 K7EM74 188 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 TRDMT1O14717 391 aaKnown RBP1.89□□□□□ -2.11
SMC4-205ENST00000465563 FARS2O95363 451 aaKnown RBP1.89□□□□□ -2.11
SMC4-205ENST00000465563 PAHP00439 452 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 MT-ND4P03905 459 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 GGT2P36268 569 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 TALDO1P37837 337 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 PRLHRP49683 370 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 CLDN6P56747 220 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 PITPNAQ00169 270 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 DOC2AQ14183 400 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 TFDP2Q14188 446 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 OR1Q1Q15612 314 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 SLC25A35Q3KQZ1 300 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 TMEM236Q5W0B7 351 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 STEAP4Q687X5 459 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 CD300LGQ6UXG3 332 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 RAB43Q86YS6 212 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 DAW1Q8N136 415 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 TRAM1L1Q8N609 369 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 OR5T1Q8NG75 326 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 OR1L1Q8NH94 360 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 RXFP4Q8TDU9 374 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 GHSRQ92847 366 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 ISOC2Q96AB3 205 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 CERS2Q96G23 380 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 SMARCD1Q96GM5 515 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 TBL1YQ9BQ87 522 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 IL22Q9GZX6 179 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 BLZF1Q9H2G9 400 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 ZSCAN16Q9H4T2 348 aaPredicted RBP1.89□□□□□ -2.11
SMC4-205ENST00000465563 TDRD3Q9H7E2 651 aaKnown RBP1.89□□□□□ -2.11
SMC4-205ENST00000465563 REEP1Q9H902 201 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 CBY1Q9Y3M2 126 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 OR51B2Q9Y5P1 312 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 NUP205Q92621 2012 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 PRR14LQ5THK1 2151 aa1.89□□□□□ -2.11
SMC4-205ENST00000465563 H3BN98 237 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 PSPHP1O15172 72 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 EIF1BO60739 113 aaKnown RBP1.88□□□□□ -2.11
SMC4-205ENST00000465563 MPDU1O75352 247 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 CDRT1O95170 752 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 SNAI1O95863 264 aaPredicted RBP1.88□□□□□ -2.11
SMC4-205ENST00000465563 KLK1P06870 262 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 IL1RNP18510 177 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 CXCR1P25024 350 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 CCT6AP40227 531 aaKnown RBP1.88□□□□□ -2.11
SMC4-205ENST00000465563 PEX19P40855 299 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 EIF1P41567 113 aaKnown RBP1.88□□□□□ -2.11
SMC4-205ENST00000465563 LCN2P80188 198 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 TSC22D1Q15714 1073 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 KRTAP13-4Q3LI77 160 aa1.88□□□□□ -2.11
SMC4-205ENST00000465563 TPRG1LQ5T0D9 272 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms