RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 RIMS3Q9UJD0 308 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 POLR1DQ9Y2S0 133 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 LHFPL6Q9Y693 200 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 PLECQ15149 4684 aaKnown RBP12.03□□□□□ -0.48
HDAC6-214ENST00000465269 TEX13CA0A0J9YWL9 993 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 A0A1W2PQ09 198 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 SLC16A7O60669 478 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 DUS4LO95620 317 aaKnown RBP12.03□□□□□ -0.48
HDAC6-214ENST00000465269 LCATP04180 440 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 IFI30P13284 250 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 JUNBP17275 347 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-214ENST00000465269 RBM34P42696 430 aaKnown RBP12.03□□□□□ -0.48
HDAC6-214ENST00000465269 MICBQ29980 383 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 KHDC1LQ5JSQ8 128 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 MEPCEQ7L2J0 689 aaKnown RBP12.03□□□□□ -0.48
HDAC6-214ENST00000465269 OR13C2Q8NGS9 318 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 SLC26A7Q8TE54 656 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 SH3GLB1Q9Y371 365 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 SF3B6Q9Y3B4 125 aaKnown RBP12.03□□□□□ -0.48
HDAC6-214ENST00000465269 MED31Q9Y3C7 131 aa12.03□□□□□ -0.48
HDAC6-214ENST00000465269 LSM4Q9Y4Z0 139 aaKnown RBP12.03□□□□□ -0.48
HDAC6-214ENST00000465269 A6NDX4 124 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 CXCR6O00574 342 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 GSC2O15499 205 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 HSD17B1P14061 328 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 COX7A1P24310 79 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 KDELR2P33947 212 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 TGM4P49221 684 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 RASSF2P50749 326 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 ZNF92Q03936 586 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 DGUOKQ16854 277 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 LRRC23Q53EV4 343 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-214ENST00000465269 GLYATQ6IB77 296 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 ETV3LQ6ZN32 361 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 CFAP77Q6ZQR2 320 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 CCDC80Q76M96 950 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 SLC36A1Q7Z2H8 476 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 MRPL21Q7Z2W9 205 aaKnown RBP12.02□□□□□ -0.49
HDAC6-214ENST00000465269 PATL1Q86TB9 770 aaKnown RBP12.02□□□□□ -0.49
HDAC6-214ENST00000465269 LINC00346Q8IVM7 164 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 MRPL41Q8IXM3 137 aaKnown RBP12.02□□□□□ -0.49
HDAC6-214ENST00000465269 MKXQ8IYA7 352 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 BPIFA2Q96DR5 249 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 LYZL4Q96KX0 146 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 COQ7Q99807 217 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 SYT4Q9H2B2 425 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 PPP1R3EQ9H7J1 279 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 PALMDQ9NP74 551 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 ZNF391Q9UJN7 358 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 AURKCQ9UQB9 309 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 TCF19Q9Y242 345 aa12.02□□□□□ -0.49
HDAC6-214ENST00000465269 PRSS37A4D1T9 235 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 H0YAE9 185 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 H0YHG0 523 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 M0R1W7 72 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 DNAJC8O75937 253 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-214ENST00000465269 POU1F1P28069 291 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 OR1E2P47887 323 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 SLC9A3P48764 834 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 CENPAP49450 140 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 LSM6P62312 80 aaKnown RBP12.01□□□□□ -0.49
HDAC6-214ENST00000465269 HIST1H3AP68431 136 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 AANATQ16613 207 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 SNAI3Q3KNW1 292 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 KRTAP27-1Q3LI81 207 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 DNAL1Q4LDG9 190 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 LRRC10Q5BKY1 277 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 HIST2H3PS2Q5TEC6 136 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 LIAT1Q6ZQX7 453 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 HIST2H3AQ71DI3 136 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 GLB1L2Q8IW92 636 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 FAM162AQ96A26 154 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 TSSK2Q96PF2 358 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 CADM1Q9BY67 442 aaKnown RBP12.01□□□□□ -0.49
HDAC6-214ENST00000465269 HDHD2Q9H0R4 259 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 WDR13Q9H1Z4 485 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 ATPIF1Q9UII2 106 aa12.01□□□□□ -0.49
HDAC6-214ENST00000465269 TSSC4Q9Y5U2 329 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-214ENST00000465269 GMDSO60547 372 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 GMNNO75496 209 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 NDUFB7P17568 137 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 MALLQ13021 153 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 STUMQ69YW2 141 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 ARHGAP24Q8N264 748 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 PLPP7Q8NBV4 271 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 OR9Q1Q8NGQ5 310 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 TPD52L3Q96J77 140 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 GAFA1Q96PS6 74 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 GRHPRQ9UBQ7 328 aa12□□□□□ -0.49
HDAC6-214ENST00000465269 GGT3PA6NGU5 568 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 XKRYO14609 159 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 KHDRBS3O75525 346 aaKnown RBP11.99□□□□□ -0.49
HDAC6-214ENST00000465269 OR5F1O95221 314 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 SERPINA1P01009 418 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 IGF2P01344 180 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 MUC1P15941 1255 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-214ENST00000465269 GGT2P36268 569 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 DGCR2P98153 550 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 MS4A2Q01362 244 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 TRAP1Q12931 704 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms