RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 RHBDD3Q9Y3P4 386 aa21.5■■□□□ 1.03
U2AF1-206ENST00000464750 TNFRSF13BO14836 293 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-206ENST00000464750 NDUFA2O43678 99 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 LHBP01229 141 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 PRTN3P24158 256 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 CRISP1P54107 249 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 CSNK2BP67870 215 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 BAMBIQ13145 260 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 APOFQ13790 326 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 SNCBQ16143 134 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 FAHD1Q6P587 224 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 C11orf53Q8IXP5 236 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 FTMTQ8N4E7 242 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 LRRC29Q8WV35 223 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 C1orf147Q96MC9 270 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-206ENST00000464750 ZMAT3Q9HA38 289 aaKnown RBP21.49■■□□□ 1.03
U2AF1-206ENST00000464750 RNPEPL1Q9HAU8 725 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 LAMP5Q9UJQ1 280 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 LRP12Q9Y561 859 aa21.49■■□□□ 1.03
U2AF1-206ENST00000464750 SOX21Q9Y651 276 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-206ENST00000464750 IGHV3OR15-7A0A075B7D8 119 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 ALOX5APP20292 161 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 MTNR1AP48039 350 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 BNIP1Q12981 228 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 TEX36Q5VZQ5 186 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 CD276Q5ZPR3 534 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 KRT77Q7Z794 578 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 C3orf56Q8N813 242 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 OR8B12Q8NGG6 310 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 UTP4Q969X6 686 aaKnown RBP21.48■■□□□ 1.03
U2AF1-206ENST00000464750 NIPAL2Q9H841 368 aa21.48■■□□□ 1.03
U2AF1-206ENST00000464750 ANXA2P2A6NMY6 339 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 MRPL3P09001 348 aaKnown RBP21.47■■□□□ 1.03
U2AF1-206ENST00000464750 ACKR3P25106 362 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 DAPP51397 102 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 POU4F2Q12837 409 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 WDR82Q6UXN9 313 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 OR5K1Q8NHB7 308 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 ITPKCQ96DU7 683 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 LYZL4Q96KX0 146 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 MICU1Q9BPX6 476 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 RASSF4Q9H2L5 321 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 NBEAL1Q6ZS30 2694 aa21.47■■□□□ 1.03
U2AF1-206ENST00000464750 CCDC182A6NF36 153 aa21.46■■□□□ 1.03
U2AF1-206ENST00000464750 HCCSP53701 268 aa21.46■■□□□ 1.03
U2AF1-206ENST00000464750 IL5RAQ01344 420 aa21.46■■□□□ 1.03
U2AF1-206ENST00000464750 AWAT1Q58HT5 328 aa21.46■■□□□ 1.03
U2AF1-206ENST00000464750 LCN1P1Q5VSP4 162 aa21.46■■□□□ 1.03
U2AF1-206ENST00000464750 PCGF1Q9BSM1 259 aa21.46■■□□□ 1.03
U2AF1-206ENST00000464750 RTL8AQ9BWD3 113 aa21.46■■□□□ 1.03
U2AF1-206ENST00000464750 YIPF3Q9GZM5 350 aa21.46■■□□□ 1.03
U2AF1-206ENST00000464750 MPC1Q9Y5U8 109 aa21.46■■□□□ 1.03
U2AF1-206ENST00000464750 CFHR2P36980 270 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 PRDX4Q13162 271 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 PTGES3Q15185 160 aaKnown RBP21.45■■□□□ 1.02
U2AF1-206ENST00000464750 MICBQ29980 383 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 GPR157Q5UAW9 335 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 BRD3OSQ6XYD6 125 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 GALNT4Q8N4A0 578 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 PRRG3Q9BZD7 231 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 TLNRD1Q9H1K6 362 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 ABCB9Q9NP78 766 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 KAAG1Q9UBP8 84 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 ZNF391Q9UJN7 358 aa21.45■■□□□ 1.02
U2AF1-206ENST00000464750 MDFIC2A0A1B0GVS7 189 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 ZNF850A8MQ14 1090 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 ZNF879B4DU55 563 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 PSMD9O00233 223 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 DVL1O14640 695 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 CDIPTO14735 213 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 TMPRSS2O15393 492 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 PRKYO43930 277 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 FCN3O75636 299 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 CST4P01036 141 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 HKR1P10072 659 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 ESRRGP62508 458 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 ATP6AP1Q15904 470 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 KCTD18Q6PI47 426 aaPredicted RBP21.44■■□□□ 1.02
U2AF1-206ENST00000464750 PNLDC1Q8NA58 520 aaKnown RBP21.44■■□□□ 1.02
U2AF1-206ENST00000464750 TEAD3Q99594 435 aa21.44■■□□□ 1.02
U2AF1-206ENST00000464750 A0A1B0GW55 424 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.43■■□□□ 1.02
U2AF1-206ENST00000464750 MITFO75030 526 aaPredicted RBP21.43■■□□□ 1.02
U2AF1-206ENST00000464750 LIPFP07098 398 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 SFTPBP07988 381 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 RNASE1P07998 156 aaKnown RBP21.43■■□□□ 1.02
U2AF1-206ENST00000464750 DUX4L2P0CJ85 424 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 DUX4L3P0CJ86 424 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 DUX4L4P0CJ87 422 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 DUX4L5P0CJ88 424 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 DUX4L6P0CJ89 424 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 DUX4L7P0CJ90 424 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 MUC1P15941 1255 aaPredicted RBP21.43■■□□□ 1.02
U2AF1-206ENST00000464750 ELF3P78545 371 aaPredicted RBP21.43■■□□□ 1.02
U2AF1-206ENST00000464750 SLC9A3R2Q15599 337 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 WDR38Q5JTN6 314 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 DUX4L9Q6RFH8 374 aaPredicted RBP21.43■■□□□ 1.02
U2AF1-206ENST00000464750 FAM81AQ8TBF8 368 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 ST8SIA4Q92187 359 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 PIGCQ92535 297 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms